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L3_131_368G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_93_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..2735
DNA (2733bp) protein (911aa)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A0N7_BIFBR
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EPD75737.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
HsdR-like protein of type I restriction modification system
L3_131_368G1_scaffold_93_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2864..3793)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZH65_BIFBR
Fic family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75736.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3978..5198)
DNA (1221bp) protein (407aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
S-adenosylmethionine synthase n=2 Tax=Bifidobacterium breve RepID=F6C7T5_BIFBA
S-adenosylmethionine synthetase
L3_131_368G1_scaffold_93_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5484..5768)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
DNA-directed RNA polymerase subunit omega n=5 Tax=Bifidobacterium breve RepID=F6C7T6_BIFBA
DNA-directed RNA polymerase omega chain
L3_131_368G1_scaffold_93_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6028..7797
DNA (1770bp) protein (590aa)
ilvD; Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroxy-acid dehydratase n=5 Tax=Bifidobacterium breve RepID=F9Y2I8_BIFBU
L3_131_368G1_scaffold_93_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8094..9107)
DNA (1014bp) protein (338aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Methionyl-tRNA formyltransferase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BRC3_BIFBR
Methionyl-tRNA formyltransferase
L3_131_368G1_scaffold_93_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9246..9950)
DNA (705bp) protein (235aa)
HAD hydrolase, family IA n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZH61_BIFBR
Haloacid dehalogenase-like hydrolase (HAD superfamily)
HAD hydrolase, family IA {ECO:0000313|EMBL:EPD75731.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10100..12409)
DNA (2310bp) protein (770aa)
Primosomal protein N n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7U0_BIFBA
Primosomal protein N'
Primosomal protein N {ECO:0000313|EMBL:AEF26337.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_93_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12457..13179)
DNA (723bp) protein (241aa)
Phosphoserine phosphatase SerB {ECO:0000313|EMBL:AEF27185.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AEF27185.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phosphoserine phosphatase SerB n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7U1_BIFBA
Phosphoserine phosphatase
L3_131_368G1_scaffold_93_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13230..13925
DNA (696bp) protein (232aa)
Membrane protein DedA family protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L228_BIFBR
DedA family protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75728.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13979..15553
DNA (1575bp) protein (525aa)
AAA ATPase forming ring-shaped complexes n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L229_BIFBR
AAA family ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_131_368G1_scaffold_93_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15613..16326)
DNA (714bp) protein (238aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bifidobacterium breve RepID=D4BRC9_BIFBR
Haloacid dehalogenase-like hydrolase (HAD superfamily)
Putative hydrolase {ECO:0000313|EMBL:BAR00485.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_93_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16570..18063
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZMW7_BIFBR
Transcription antiterminator, BglG family
Uncharacterized protein {ECO:0000313|EMBL:EPD75725.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18060..18488
DNA (429bp) protein (143aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=3 Tax=Bifidobacterium breve RepID=F6C7U6_BIFBA
Nitrogen regulatory IIA (Enzyme IIA-NTR) (Phosphotransferase enzyme II, A component) transcription regulator protein
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:AEF26437.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_93_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18531..19001
DNA (471bp) protein (157aa)
PTS system, fructose-like IIA component n=2 Tax=Bifidobacterium breve RepID=F9Y2H8_BIFBU
PTS system, fructose-like IIA component
PTS system, fructose-like IIA component {ECO:0000313|EMBL:AHJ19755.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_131_368G1_scaffold_93_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19052..19363
DNA (312bp) protein (104aa)
PTS system, fructose-like IIB component n=2 Tax=Bifidobacterium breve RepID=F9Y2H7_BIFBU
PTS system, fructose-like IIB component
PTS system, fructose-like IIB component {ECO:0000313|EMBL:AHJ19754.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_131_368G1_scaffold_93_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19415..20533
DNA (1119bp) protein (373aa)
PTS system, fructose-like enzyme IIC component {ECO:0000313|EMBL:ABE96058.1}; EC=2.7.1.69 {ECO:0000313|EMBL:ABE96058.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
PTS system, fructose-like enzyme IIC component n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2H6_BIFBU
PTS system, fructose-like enzyme IIC component
L3_131_368G1_scaffold_93_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20711..21427
DNA (717bp) protein (239aa)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:ABE96057.1}; EC=5.1.3.1 {ECO:0000313|EMBL:ABE96057.1};; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
Ribulose-phosphate 3-epimerase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y2H5_BIFBU
Ribulose-phosphate 3-epimerase
L3_131_368G1_scaffold_93_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21530..23203
DNA (1674bp) protein (558aa)
proteasome accessory factor PafA2 (EC:6.3.2.-)
Proteasome accessory factor PafA2 {ECO:0000313|EMBL:AEF26611.1}; EC=6.3.2.- {ECO:0000313|EMBL:AEF26611.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Proteasome accessory factor PafA2 n=2 Tax=Bifidobacterium breve RepID=F6C7V0_BIFBA
L3_131_368G1_scaffold_93_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23209..24111
DNA (903bp) protein (301aa)
Inositol monophosphatase family protein n=6 Tax=Bifidobacterium breve RepID=F9Y2H3_BIFBU
Inositol monophosphatase family protein
Inositol monophosphatase family protein {ECO:0000313|EMBL:AHJ21547.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_93_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24221..24418
DNA (198bp) protein (66aa)
Ubiquitin-like protein Pup n=6 Tax=Bifidobacterium breve RepID=F6C7V2_BIFBA
Hypothetical protein with DUF797 domain
Ubiquitin-like protein Pup {ECO:0000313|EMBL:AEF26371.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_93_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24418..25905
DNA (1488bp) protein (496aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Pup--protein ligase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CVK9_BIFBR
Hypothetical protein with DUF275 domain
L3_131_368G1_scaffold_93_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26012..26293)
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=6 Tax=Bifidobacterium breve RepID=F6C7V4_BIFBA
DNA-binding protein HU
DNA-binding protein HB1 {ECO:0000313|EMBL:ERI88092.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_131_368G1_scaffold_93_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26431..28995)
DNA (2565bp) protein (855aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7V5_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:EFE88786.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
hypothetical protein
L3_131_368G1_scaffold_93_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29068..30504)
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase n=4 Tax=Bifidobacterium breve RepID=S2ZG75_BIFBR
putative adenylosuccinate lyase
Adenylosuccinate lyase {ECO:0000313|EMBL:EPD75713.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30638..31282
DNA (645bp) protein (215aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C7V7_BIFBA
Permease protein of ABC transporter system
Uncharacterized protein {ECO:0000313|EMBL:EPD75712.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_93_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31309..32889)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BRE4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EFE88789.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Hypothetical protein
L3_131_368G1_scaffold_93_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33321..33893)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZMV3_BIFBR
putative secreted protein
Uncharacterized protein {ECO:0000313|EMBL:ERI88085.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_131_368G1_scaffold_93_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33890..34927)
DNA (1038bp) protein (346aa)
von Willebrand factor type A domain protein n=4 Tax=Bifidobacterium breve RepID=D4BRE7_BIFBR
putative membrane spanning protein with a von Willebrand factor type A domain
Putative membrane spanning protein with a von Willebrand factor type A domain {ECO:0000313|EMBL:AHJ21539.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_93_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34924..35982)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=D4BRE8_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:EPD75708.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying items 1-30 of 102 in total

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