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L3_131_368G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 176 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_178_1
unknown

Not on your lists

1..285
DNA (285bp) protein (95aa)

This feature has no annotations

L3_131_368G1_scaffold_178_2
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

305..1663
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49415.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_131_368G1_scaffold_178_3
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1660..2202
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A2G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ23522.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_131_368G1_scaffold_178_4
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2257..2778
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L0Z4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49417.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_131_368G1_scaffold_178_5
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2886..3413)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036E0090
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
L3_131_368G1_scaffold_178_6
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3397..4065)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXF4_TEPAE
Uncharacterized protein {ECO:0000313|EMBL:KHF28963.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
hypothetical protein
L3_131_368G1_scaffold_178_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4069..5283)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LK01_ACEWD
Uncharacterized protein {ECO:0000313|EMBL:KJF38448.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_131_368G1_scaffold_178_8
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5554..6327)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP26929.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L3_131_368G1_scaffold_178_9
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6327..7772)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=A8SQD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ93326.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_131_368G1_scaffold_178_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8088..9023
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LSM9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23787.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_131_368G1_scaffold_178_11
Firmicutes bacterium CAG:791, Firmicutes, Bacteria

Not on your lists

9023..9781
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:791 RepID=R5CJC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX66589.1}; TaxID=1262993 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:791.;"
hypothetical protein
L3_131_368G1_scaffold_178_12
unknown

Not on your lists

9842..10021
DNA (180bp) protein (60aa)

This feature has no annotations

L3_131_368G1_scaffold_178_13
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10400..10792
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49420.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_131_368G1_scaffold_178_14
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10824..11534
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3AGX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61678.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_131_368G1_scaffold_178_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11559..12554
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03933.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_131_368G1_scaffold_178_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12555..13931
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98524.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
murein hydrolase
L3_131_368G1_scaffold_178_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13969..17178
DNA (3210bp) protein (1070aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98525.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_131_368G1_scaffold_178_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17285..17821
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3AGW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61673.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_131_368G1_scaffold_178_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17907..18569
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55621.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_178_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18566..19834
DNA (1269bp) protein (423aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03928.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_131_368G1_scaffold_178_21
unknown

Not on your lists

comp(19846..20016)
DNA (171bp) protein (57aa)

This feature has no annotations

L3_131_368G1_scaffold_178_22
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20089..21804
DNA (1716bp) protein (572aa)
TraG/TraD family protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C728_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:EFE14366.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Type IV secretory pathway, VirD4 components
L3_131_368G1_scaffold_178_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21875..23317
DNA (1443bp) protein (481aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK48_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94942.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_131_368G1_scaffold_178_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23400..24530)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI000287C7B1
Uncharacterized protein {ECO:0000313|EMBL:EFV19668.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
yddK; hypothetical protein
L3_131_368G1_scaffold_178_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24750..25061)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T1S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ59473.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_131_368G1_scaffold_178_26
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25078..26340)
DNA (1263bp) protein (421aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=2 Tax=Blautia RepID=A7B1K3_RUMGN
L3_131_368G1_scaffold_178_27
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26410..27015)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D3AJT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61526.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_131_368G1_scaffold_178_28
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27217..28197
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Streptococcus anginosus subsp. whileyi MAS624 RepID=S6B745_STRAP
Uncharacterized protein {ECO:0000313|EMBL:KGF33262.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
hypothetical protein
L3_131_368G1_scaffold_178_29
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28707..28961)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JHQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33735.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Predicted transcriptional regulators
L3_131_368G1_scaffold_178_30
unknown

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comp(29355..29474)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying items 1-30 of 176 in total

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