ggKbase home page

L3_131_368G1_scaffold_195

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_195_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..66
DNA (66bp) protein (22aa)
Transposase for IS3509a n=3 Tax=Bifidobacterium longum RepID=B7GP90_BIFLS
transposase
Uncharacterized protein {ECO:0000313|EMBL:EIJ21426.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_131_368G1_scaffold_195_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

491..1567
DNA (1077bp) protein (359aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Homoserine O-succinyltransferase n=2 Tax=Bifidobacterium breve RepID=U2CUK3_BIFBR
Homoserine O-succinyltransferase
L3_131_368G1_scaffold_195_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1912..2721
DNA (810bp) protein (270aa)
ATP synthase subunit a n=4 Tax=Bifidobacterium breve RepID=F6C701_BIFBA
ATP synthase A chain
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2819..3049
DNA (231bp) protein (77aa)
atpE; ATP synthase F0 subunit C (EC:3.6.3.14)
ATP synthase F0, C subunit n=4 Tax=Bifidobacterium breve RepID=F6C702_BIFBA
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3115..3633
DNA (519bp) protein (173aa)
ATP synthase subunit b n=3 Tax=Bifidobacterium breve RepID=F6C703_BIFBA
atpF; ATP synthase B chain
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_195_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3668..4504
DNA (837bp) protein (279aa)
ATP synthase subunit delta n=4 Tax=Bifidobacterium breve RepID=F6C704_BIFBA
ATP synthase delta chain
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_195_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4573..6204
DNA (1632bp) protein (544aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
ATP synthase subunit alpha n=5 Tax=Bifidobacterium breve RepID=F9Y1C5_BIFBU
ATP synthase alpha chain
L3_131_368G1_scaffold_195_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6208..7131
DNA (924bp) protein (308aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=7 Tax=Bifidobacterium breve RepID=F9Y1C6_BIFBU
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7140..8612
DNA (1473bp) protein (491aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
ATP synthase subunit beta n=4 Tax=Bifidobacterium breve RepID=F6C707_BIFBA
ATP synthase beta chain
L3_131_368G1_scaffold_195_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8612..8905
DNA (294bp) protein (98aa)
ATP synthase F1, epsilon subunit n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZQL2_BIFBR
ATP synthase F1, epsilon subunit {ECO:0000313|EMBL:EPD76645.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
ATP synthase epsilon chain
L3_131_368G1_scaffold_195_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8992..9696
DNA (705bp) protein (235aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Endonuclease NucS n=5 Tax=Bifidobacterium breve RepID=F9Y1C9_BIFBU
Hypothetical protein with DUF91 domain
L3_131_368G1_scaffold_195_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9744..10697)
DNA (954bp) protein (318aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C710_BIFBA
Peptidyl-prolyl cis-trans isomerase
L3_131_368G1_scaffold_195_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10778..12037
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E5T8_BIFBR
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:ERI87776.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_131_368G1_scaffold_195_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12037..13041
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI0002DA7B30
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:AHJ20539.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_195_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13300..14235
DNA (936bp) protein (312aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=D4BMC1_BIFBR
thioredoxin-like protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89940.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14374..15000)
DNA (627bp) protein (209aa)
Adenylate cyclase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMC2_BIFBR
Hypothetical protein with CYTH domain, possible adenylate cyclase
Adenylate cyclase {ECO:0000313|EMBL:EFE89941.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ99311.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15393..15533
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A365_BIFBR
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ20542.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_195_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15679..16068
DNA (390bp) protein (130aa)
Translation initiation inhibitor n=4 Tax=Bifidobacterium breve RepID=F9Y1D6_BIFBU
Translation initiation inhibitor
Translation initiation inhibitor {ECO:0000313|EMBL:ABE95039.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_131_368G1_scaffold_195_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16194..17147
DNA (954bp) protein (318aa)
1-acylglycerol-3-phosphate O-acyltransferase n=3 Tax=Bifidobacterium breve RepID=S3AJY9_BIFBR
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AHJ20544.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_195_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17340..18341
DNA (1002bp) protein (334aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=3 Tax=Bifidobacterium breve RepID=F9Y1D8_BIFBU
Glycerol-3-phosphate dehydrogenase [NAD(P) ]
L3_131_368G1_scaffold_195_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18387..19574
DNA (1188bp) protein (396aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
D-alanine--D-alanine ligase n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C719_BIFBA
ddlA; D-alanine--D-alanine ligase
L3_131_368G1_scaffold_195_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19839..21005
DNA (1167bp) protein (389aa)
ABC Polyamine/Opine/Phosphonate transporter, periplasmic ligand binding protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KYU8_BIFBR
Solute binding protein of ABC transporter system
Solute binding protein of ABC transporter system {ECO:0000313|EMBL:AHJ20547.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_195_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21017..21955
DNA (939bp) protein (313aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMC9_BIFBR
Permease protein of ABC transporter system
ABC transporter permease component {ECO:0000313|EMBL:BAQ99319.1}; ABC transporter, permease protein {ECO:0000313|EMBL:EFE89948.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21946..22863
DNA (918bp) protein (306aa)
ABC transporter permease n=1 Tax=Bifidobacterium breve RepID=UPI0002DFDDAE
ABC transporter permease component {ECO:0000313|EMBL:BAQ99320.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Permease protein of ABC transporter system
L3_131_368G1_scaffold_195_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22866..24179
DNA (1314bp) protein (438aa)
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1E3_BIFBU
ATP-binding protein of ABC transporter system
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE89950.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_195_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24596..25633
DNA (1038bp) protein (346aa)
Conserved hypothetical membrane spanning protein in CAAX amino terminal protease family n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9Y1E4_BIFBU
Conserved hypothetical membrane spanning protein in CAAX amino terminal protease family
Conserved hypothetical membrane spanning protein in CAAX amino terminal protease family {ECO:0000313|EMBL:ABE95047.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_131_368G1_scaffold_195_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25765..26577)
DNA (813bp) protein (271aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E5S8_BIFBR
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:ERI87761.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
transporter, small conductance mechanosensitive ion channel MscS family protein
L3_131_368G1_scaffold_195_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26737..28170)
DNA (1434bp) protein (478aa)
Putative aspartate ammonia-lyase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BMD4_BIFBR
Aspartate ammonia-lyase {ECO:0000313|EMBL:BAQ99324.1}; Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EFE89953.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Aspartate ammonia-lyase
L3_131_368G1_scaffold_195_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28302..28460)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AK00_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76664.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
putative transposase
L3_131_368G1_scaffold_195_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28888..29691)
DNA (804bp) protein (268aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=S2ZQN9_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76665.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Hypothetical membrane spanning protein with DUF81 domain
Displaying items 1-30 of 80 in total

View Taxonomy