ggKbase home page

L3_131_368G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_218_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(299..1996)
DNA (1698bp) protein (566aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X207_9CLOT
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:CDA09758.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
pgm1; phosphoglucomutase
L3_131_368G1_scaffold_218_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2444..2620)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09759.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_131_368G1_scaffold_218_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2694..2960)
DNA (267bp) protein (89aa)
UPI0003D65967 related cluster n=1 Tax=unknown RepID=UPI0003D65967
Uncharacterized protein {ECO:0000313|EMBL:ETI96968.1}; Flags: Fragment;; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ATPase AAA
L3_131_368G1_scaffold_218_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2941..3168)
DNA (228bp) protein (76aa)
UPI0003D65967 related cluster n=1 Tax=unknown RepID=UPI0003D65967
Uncharacterized protein {ECO:0000313|EMBL:ETI96968.1}; Flags: Fragment;; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
putative ATPase
L3_131_368G1_scaffold_218_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3916..5280
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95894.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transposase
L3_131_368G1_scaffold_218_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5602..7284)
DNA (1683bp) protein (561aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Acetolactate synthase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABB0_9FIRM
ilvB; acetolactate synthase large subunit
L3_131_368G1_scaffold_218_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7617..8606)
DNA (990bp) protein (330aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D612D6 related cluster n=1 Tax=unknown RepID=UPI0003D612D6
ilvC; ketol-acid reductoisomerase
L3_131_368G1_scaffold_218_8
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8987..9205)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09952.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_131_368G1_scaffold_218_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9550..9714)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94284.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_131_368G1_scaffold_218_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9764..10546)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95889.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
conserved hypothetical protein
L3_131_368G1_scaffold_218_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10550..11881)
DNA (1332bp) protein (444aa)
Transporter n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sodium- and chloride- dependent transporter
L3_131_368G1_scaffold_218_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12106..13071
DNA (966bp) protein (322aa)
Putative membrane protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDQ95887.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_131_368G1_scaffold_218_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13159..13656
DNA (498bp) protein (166aa)
YbaK/proline--tRNA ligase associated domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94280.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_131_368G1_scaffold_218_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13825..14403)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95885.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_131_368G1_scaffold_218_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14560..15129)
DNA (570bp) protein (190aa)
HDIG domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABA1_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EDQ95884.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
metal dependent phosphohydrolase
L3_131_368G1_scaffold_218_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15487..16413)
DNA (927bp) protein (309aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
peptidyl-prolyl isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XC37_9CLOT
L3_131_368G1_scaffold_218_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16459..17256)
DNA (798bp) protein (266aa)
Polysaccharide deacetylase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X598_9CLOT
Polysaccharide deacetylase {ECO:0000313|EMBL:CDA09960.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
polysaccharide deacetylase
L3_131_368G1_scaffold_218_18
Streptococcus sp. DORA_10, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17555..17929)
DNA (375bp) protein (125aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=1403937 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. DORA_10.;"
hisI; histidine biosynthesis bifunctional protein HisIE (EC:3.5.4.19 3.6.1.31)
UPI0003D64750 related cluster n=1 Tax=unknown RepID=UPI0003D64750
L3_131_368G1_scaffold_218_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18024..18782)
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZS1_9CLOT
hisF; imidazole glycerol phosphate synthase subunit
L3_131_368G1_scaffold_218_20

Not on your lists

comp(18776..19489)
DNA (714bp) protein (238aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2J2_9CLOT
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:ETJ16978.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methyliden eamino] imidazole-4-carboxamide isomerase
L3_131_368G1_scaffold_218_21

Not on your lists

comp(19486..20094)
DNA (609bp) protein (203aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XC42_9CLOT
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000313|EMBL:ETJ16977.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_368G1_scaffold_218_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20094..20672)
DNA (579bp) protein (193aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hisB; Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5A5_9CLOT
L3_131_368G1_scaffold_218_23
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20766..21797)
DNA (1032bp) protein (344aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Histidinol-phosphate aminotransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XMS2_9CLOT
hisC; histidinol-phosphate aminotransferase
L3_131_368G1_scaffold_218_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21919..22569)
DNA (651bp) protein (217aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ATP phosphoribosyltransferase n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AB91_9FIRM
ATP phosphoribosyltransferase
L3_131_368G1_scaffold_218_25

Not on your lists

comp(22581..23528)
DNA (948bp) protein (316aa)
Putative ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2J7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ16973.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hisZ; ATP phosphoribosyltransferase regulatory subunit
L3_131_368G1_scaffold_218_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23987..25039)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XC48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09969.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_131_368G1_scaffold_218_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25320..26540)
DNA (1221bp) protein (407aa)
VanW-like protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5B0_9CLOT
VanW-like protein {ECO:0000313|EMBL:CDA09970.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative vancomycin resistance protein, vanWfamily
L3_131_368G1_scaffold_218_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26713..27045)
DNA (333bp) protein (111aa)
Uncharacterized protein n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XMS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09971.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_131_368G1_scaffold_218_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27132..28400)
DNA (1269bp) protein (423aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Dihydroorotase n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XZT1_9CLOT
pyrC; dihydroorotase
L3_131_368G1_scaffold_218_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28632..29780)
DNA (1149bp) protein (383aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X2K5_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA09973.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
iron-sulfur protein
Displaying items 1-30 of 87 in total

View Taxonomy