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L3_131_368G1_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_222_1
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

259..3186
DNA (2928bp) protein (976aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SU88_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDC64818.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_222_2
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3217..3321
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4Y4_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05311.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3572..4246
DNA (675bp) protein (225aa)
Two component transcriptional regulator winged helix family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXV1_9FIRM
Two-component system transcriptional regulator
Two component transcriptional regulator winged helix family {ECO:0000313|EMBL:CDC64820.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_222_4
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4230..5774
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Two-component system sensor histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TAE4_9FIRM
L3_131_368G1_scaffold_222_5
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6488..6955)
DNA (468bp) protein (156aa)
SsrA-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U1S4_9FIRM
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7172..8539
DNA (1368bp) protein (456aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SU94_9FIRM
multidrug resistance protein, MATE family, drug/sodium antiporter
Multidrug resistance protein, MATE family,drug/sodium antiporter {ECO:0000313|EMBL:CCO05263.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_7
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8939..9565)
DNA (627bp) protein (209aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SXV6_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC64825.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_131_368G1_scaffold_222_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9752..10651)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC64827.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_131_368G1_scaffold_222_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10968..11993)
DNA (1026bp) protein (342aa)
HRDC domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MM57_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05260.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12329..12955
DNA (627bp) protein (209aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05258.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12934..13239
DNA (306bp) protein (102aa)
AAA domain protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CKV1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05257.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_12
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13501..14292)
DNA (792bp) protein (264aa)
hypothetical protein (EC:2.1.1.-)
O-Methyltransferase involved in polyketide biosynthesis n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCO05253.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14471..14770)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC66223.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_222_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14845..15573)
DNA (729bp) protein (243aa)
Ser/Thr phosphatase family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T1Z9_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDC66225.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_131_368G1_scaffold_222_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15877..16362
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T956_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05247.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16858..18186)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T214_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC66240.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_222_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18205..19029)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TEE3_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05245.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_18
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19026..19928)
DNA (903bp) protein (301aa)
LysR substrate binding domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U5X7_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDC66242.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Transcriptional regulator, LysR family
L3_131_368G1_scaffold_222_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20064..20777
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYH3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05243.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21122..21913
DNA (792bp) protein (264aa)
Carbohydrate Esterase Family 1 protein (EC:3.1.-.-)
Carbohydrate Esterase Family 1 protein {ECO:0000313|EMBL:CCO05242.1}; EC=3.1.-.- {ECO:0000313|EMBL:CCO05242.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Predicted esterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T961_9FIRM
L3_131_368G1_scaffold_222_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22067..23029)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57385.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_131_368G1_scaffold_222_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23131..24702)
DNA (1572bp) protein (524aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
lysS; Lysyl-tRNA synthetase, class II (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3N0_9FIRM
L3_131_368G1_scaffold_222_23
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24740..25216)
DNA (477bp) protein (159aa)
Transcription elongation factor GreA n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZM0_9FIRM
greA; Transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_24
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25473..26813
DNA (1341bp) protein (447aa)
Glycosyl hydrolase family 43 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SW53_9FIRM
Glycoside Hydrolase Family 43 protein / Carbohydrate-Binding Module Family 6 protein
Glycoside Hydrolase Family 43 protein / Carbohydrate-Binding Module Family 6 protein {ECO:0000313|EMBL:CCO05196.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_25
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26825..28609
DNA (1785bp) protein (595aa)
Endoglucanase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZK5_9FIRM
Glycoside Hydrolase Family 5 protein
Glycoside Hydrolase Family 5 protein {ECO:0000313|EMBL:CCO05195.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_26
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28672..30645)
DNA (1974bp) protein (658aa)
CotH protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M8_9FIRM
CotH protein {ECO:0000313|EMBL:CDC65409.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L3_131_368G1_scaffold_222_27
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30849..31616)
DNA (768bp) protein (256aa)
coaX; pantothenate kinase, type III (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274, ECO:0000313|EMBL:CCO05192.1};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Type III pantothenate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3K1_9FIRM
L3_131_368G1_scaffold_222_28
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31641..32264)
DNA (624bp) protein (208aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TC34_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05191.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L3_131_368G1_scaffold_222_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32732..33946
DNA (1215bp) protein (405aa)
Alcohol dehydrogenase, iron-type (EC:1.1.1.1)
Alcohol dehydrogenase iron-dependent n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6M2_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDC65404.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L3_131_368G1_scaffold_222_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34117..34683
DNA (567bp) protein (189aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U3J2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05189.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 72 in total

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