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L3_131_368G1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_254_1
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..81)
DNA (81bp) protein (27aa)
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CEP45558.1}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CEP45558.1};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VVC3_CLOBI
L3_131_368G1_scaffold_254_2
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(242..913)
DNA (672bp) protein (224aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Clostridiales RepID=B0A8H3_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDA10062.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_131_368G1_scaffold_254_3
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1071..2513
DNA (1443bp) protein (481aa)
DEAD/DEAH box helicase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XN07_9CLOT
DEAD/DEAH box helicase {ECO:0000313|EMBL:CDA10061.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
csdA; ATP-dependent RNA helicase
L3_131_368G1_scaffold_254_4
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2551..2988)
DNA (438bp) protein (146aa)
UPI0003D5B988 related cluster n=1 Tax=unknown RepID=UPI0003D5B988
Uncharacterized protein {ECO:0000313|EMBL:ETI93764.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_131_368G1_scaffold_254_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3131..4630)
DNA (1500bp) protein (500aa)
UPI0003D631C7 related cluster n=1 Tax=unknown RepID=UPI0003D631C7
Uncharacterized protein {ECO:0000313|EMBL:ETI93765.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
amino acid carrier protein
L3_131_368G1_scaffold_254_6
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5348..6532
DNA (1185bp) protein (395aa)
UPI0003D67F2E related cluster n=1 Tax=unknown RepID=UPI0003D67F2E
Uncharacterized protein {ECO:0000313|EMBL:ETI90359.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicoccus succinicivorans DORA_17_25.;"
seryl-tRNA synthetase
L3_131_368G1_scaffold_254_7
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6633..7646
DNA (1014bp) protein (338aa)
UPI0003D61434 related cluster n=1 Tax=unknown RepID=UPI0003D61434
Uncharacterized protein {ECO:0000313|EMBL:ETI96507.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
3-oxoacyl-(acyl-carrier-protein) synthase III
L3_131_368G1_scaffold_254_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7662..9482
DNA (1821bp) protein (607aa)
UPI0003D67076 related cluster n=1 Tax=unknown RepID=UPI0003D67076
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ETI96506.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_131_368G1_scaffold_254_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9509..9745
DNA (237bp) protein (79aa)
UPI0003D650E8 related cluster n=1 Tax=unknown RepID=UPI0003D650E8
Acyl carrier protein {ECO:0000313|EMBL:ETI96505.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
acyl carrier protein
L3_131_368G1_scaffold_254_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9747..10751
DNA (1005bp) protein (335aa)
UPI0003D5C72B related cluster n=1 Tax=unknown RepID=UPI0003D5C72B
Uncharacterized protein {ECO:0000313|EMBL:ETI96504.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_131_368G1_scaffold_254_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10777..11460
DNA (684bp) protein (228aa)
UPI0003D69A12 related cluster n=1 Tax=unknown RepID=UPI0003D69A12
Uncharacterized protein {ECO:0000313|EMBL:ETI96503.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
4-phosphopantetheinyl transferase
L3_131_368G1_scaffold_254_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11439..12299
DNA (861bp) protein (287aa)
UPI0003D62279 related cluster n=1 Tax=unknown RepID=UPI0003D62279
Formyl transferase protein {ECO:0000313|EMBL:ETI96502.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
formyltransferase domain protein
L3_131_368G1_scaffold_254_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12346..13047
DNA (702bp) protein (234aa)
UPI0003D5C20F related cluster n=1 Tax=unknown RepID=UPI0003D5C20F
ABC transporter related protein {ECO:0000313|EMBL:ETI96501.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
ABC transporter related protein
L3_131_368G1_scaffold_254_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13048..15351
DNA (2304bp) protein (768aa)
UPI0003D5F157 related cluster n=1 Tax=unknown RepID=UPI0003D5F157
Uncharacterized protein {ECO:0000313|EMBL:ETI96500.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
L3_131_368G1_scaffold_254_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15415..16407
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
UPI0003D63DF8 related cluster n=1 Tax=unknown RepID=UPI0003D63DF8
L3_131_368G1_scaffold_254_16
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16446..16664
DNA (219bp) protein (73aa)
UPI0003D66068 related cluster n=1 Tax=unknown RepID=UPI0003D66068
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
acyl carrier protein
L3_131_368G1_scaffold_254_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16722..17663
DNA (942bp) protein (314aa)
UPI0003D6749D related cluster n=1 Tax=unknown RepID=UPI0003D6749D
Uncharacterized protein {ECO:0000313|EMBL:ETI96497.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
2-nitropropane dioxygenase, NPD
L3_131_368G1_scaffold_254_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17673..18908
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
UPI0003D677F2 related cluster n=1 Tax=unknown RepID=UPI0003D677F2
L3_131_368G1_scaffold_254_19
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18967..19836
DNA (870bp) protein (290aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta (EC:6.4.1.2)
UPI0003D60954 related cluster n=1 Tax=unknown RepID=UPI0003D60954
L3_131_368G1_scaffold_254_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19829..20635
DNA (807bp) protein (269aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
UPI0003D5D8A5 related cluster n=1 Tax=unknown RepID=UPI0003D5D8A5
L3_131_368G1_scaffold_254_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20754..21695
DNA (942bp) protein (314aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
UPI0003D5D483 related cluster n=1 Tax=unknown RepID=UPI0003D5D483
L3_131_368G1_scaffold_254_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22505
DNA (741bp) protein (247aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
UPI0003D5AFE4 related cluster n=1 Tax=unknown RepID=UPI0003D5AFE4
Uncharacterized protein {ECO:0000313|EMBL:ETI96492.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_131_368G1_scaffold_254_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22522..23025
DNA (504bp) protein (168aa)
UPI0003D62873 related cluster n=1 Tax=unknown RepID=UPI0003D62873
Uncharacterized protein {ECO:0000313|EMBL:ETI96491.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase AccB
L3_131_368G1_scaffold_254_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23039..23461
DNA (423bp) protein (141aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
UPI0003D5E584 related cluster n=1 Tax=unknown RepID=UPI0003D5E584
L3_131_368G1_scaffold_254_25
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23470..24822
DNA (1353bp) protein (451aa)
accC; biotin carboxylase (EC:6.4.1.2)
UPI0003D626CE related cluster n=1 Tax=unknown RepID=UPI0003D626CE
Uncharacterized protein {ECO:0000313|EMBL:ETI96489.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
L3_131_368G1_scaffold_254_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25027..25413)
DNA (387bp) protein (129aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X315_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDA10058.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
iron-sulfur cluster-binding protein
L3_131_368G1_scaffold_254_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25731..26894
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y043_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10057.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
methyltransferase domain protein
L3_131_368G1_scaffold_254_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26998..28527
DNA (1530bp) protein (510aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XN04_9CLOT
Phospholipase D domain protein {ECO:0000313|EMBL:CDA10056.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_131_368G1_scaffold_254_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28692..29192
DNA (501bp) protein (167aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X5L7_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDA10055.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
acetyltransferase, GNAT family
L3_131_368G1_scaffold_254_30
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29237..29506
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI94206.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
conserved hypothetical protein
Displaying items 1-30 of 68 in total

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