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L3_131_368G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_260_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..461
DNA (459bp) protein (153aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSW2_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL09964.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_131_368G1_scaffold_260_2
unknown

Not on your lists

477..1352
DNA (876bp) protein (292aa)

This feature has no annotations

L3_131_368G1_scaffold_260_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1428..3005)
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Ruminococcus RepID=C6JCE8_9FIRM
GMP synthase
L3_131_368G1_scaffold_260_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3741..6134)
DNA (2394bp) protein (798aa)
xylS; alpha-xylosidase (EC:3.2.1.177)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77443.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_131_368G1_scaffold_260_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6355..7755)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78551.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_260_6
unknown

Not on your lists

comp(8340..8672)
DNA (333bp) protein (111aa)

This feature has no annotations

L3_131_368G1_scaffold_260_7
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8682..9014)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KSV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49378.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
transcriptional regulator
L3_131_368G1_scaffold_260_8
unknown

Not on your lists

9232..9426
DNA (195bp) protein (65aa)

This feature has no annotations

L3_131_368G1_scaffold_260_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9436..9771
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0AA09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33218.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_131_368G1_scaffold_260_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10681..11010
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BPK3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI73723.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_131_368G1_scaffold_260_11
unknown

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11028..11453
DNA (426bp) protein (142aa)

This feature has no annotations

L3_131_368G1_scaffold_260_12
unknown

Not on your lists

11463..11699
DNA (237bp) protein (79aa)

This feature has no annotations

L3_131_368G1_scaffold_260_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11719..11988
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59429.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_131_368G1_scaffold_260_14
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

12141..13703
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003672467
Uncharacterised protein {ECO:0000313|EMBL:CRH84965.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_131_368G1_scaffold_260_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13711..13947
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JVR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE68064.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L3_131_368G1_scaffold_260_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13961..14575
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IGF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI59432.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_131_368G1_scaffold_260_17
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14908..16488
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L0V8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49367.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L3_131_368G1_scaffold_260_18
unknown

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16525..16743
DNA (219bp) protein (73aa)

This feature has no annotations

L3_131_368G1_scaffold_260_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16820..17788
DNA (969bp) protein (323aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C5W5_CLOSY
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI79920.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_260_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18447..19112)
DNA (666bp) protein (222aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCF1_9FIRM
L3_131_368G1_scaffold_260_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19419..19730
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80380.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_260_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19779..20822
DNA (1044bp) protein (348aa)
Archaeal/vacuolar-type H+-ATPase subunit C (EC:3.6.3.14)
ATP synthase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR35_9FIRM
ATP synthase {ECO:0000313|EMBL:CDD80381.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_260_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20890..22830
DNA (1941bp) protein (647aa)
Archaeal/vacuolar-type H+-ATPase subunit I (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRW2_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_260_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22975..23406
DNA (432bp) protein (144aa)
ATP synthase subunit C. (EC:3.6.3.14)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80383.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_260_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23408..23716
DNA (309bp) protein (103aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCF6_9FIRM
ATP synthase (F/14-kDa) subunit {ECO:0000313|EMBL:CDD80384.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_260_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23879..24466
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77451.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Archaeal/vacuolar-type H+-ATPase subunit E
L3_131_368G1_scaffold_260_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24459..26231
DNA (1773bp) protein (591aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Archaeal/vacuolar-type H+-ATPase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain n=2 Tax=Ruminococcus RepID=C6JCF8_9FIRM
L3_131_368G1_scaffold_260_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26294..27676
DNA (1383bp) protein (461aa)
Archaeal/vacuolar-type H+-ATPase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=2 Tax=Ruminococcus RepID=C6JCF9_9FIRM
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_260_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27695..28312
DNA (618bp) protein (206aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=2 Tax=Ruminococcus RepID=C6JCG0_9FIRM
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_131_368G1_scaffold_260_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28905..29663)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76098.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cell wall-associated hydrolases (invasion-associated proteins)
Displaying items 1-30 of 93 in total

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