ggKbase home page

L3_131_368G1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_262_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

308..1306
DNA (999bp) protein (333aa)
Amidohydrolase family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DAQ9_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:ERI78547.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted metal-dependent hydrolase of the TIM-barrel fold
L3_131_368G1_scaffold_262_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1327..2634
DNA (1308bp) protein (436aa)
Transporter, major facilitator family protein n=2 Tax=Clostridiales RepID=G9YMW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54641.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ProP; major facilitator superfamily permease
L3_131_368G1_scaffold_262_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2694..3047)
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2BK82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54640.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_262_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3108..4505)
DNA (1398bp) protein (466aa)
MATE efflux family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3A8_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI78543.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
MATE efflux family protein
L3_131_368G1_scaffold_262_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4796..5224
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=3 Tax=Clostridiales RepID=G9YMV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32714.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hsp20; Heat shock protein Hsp20
L3_131_368G1_scaffold_262_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5245..5457)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DG19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78541.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_262_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5551..5751
DNA (201bp) protein (67aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YMV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32716.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Helix-turn-helix.
L3_131_368G1_scaffold_262_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5781..8411
DNA (2631bp) protein (877aa)
ATP-dependent chaperone ClpB n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFC5_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATP-dependent chaperone ClpB
L3_131_368G1_scaffold_262_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8464..9105)
DNA (642bp) protein (214aa)
ulaF2; L-ribulose-5-phosphate 4-epimerase UlaF (EC:5.1.3.4)
Putative L-ribulose-5-phosphate 4-epimerase n=3 Tax=Clostridiales RepID=G9YMV5_9FIRM
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:ERI78577.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_262_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9174..9893)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32720.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_262_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9963..10613)
DNA (651bp) protein (217aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Potassium-transporting ATPase C chain n=3 Tax=Clostridiales RepID=G9YMV3_9FIRM
potassium-transporting ATPase subunit C
L3_131_368G1_scaffold_262_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10630..12705)
DNA (2076bp) protein (692aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Potassium-transporting ATPase B chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMV2_9FIRM
potassium-transporting ATPase subunit B
L3_131_368G1_scaffold_262_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12726..14480)
DNA (1755bp) protein (585aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Potassium-transporting ATPase A chain n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C3E3_9CLOT
hypothetical protein
L3_131_368G1_scaffold_262_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14614..14712)
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32724.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_262_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15111..15335
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI78569.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_262_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16087..16518)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CFD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32726.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ethanolamine utilization protein (transcriptional regulator)
L3_131_368G1_scaffold_262_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16557..17780)
DNA (1224bp) protein (408aa)
Ethanolamine utilization protein, EutH n=3 Tax=Clostridiales RepID=G9YUG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32727.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Ethanolamine utilization protein
L3_131_368G1_scaffold_262_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17846..18385)
DNA (540bp) protein (180aa)
BMC domain protein n=3 Tax=Clostridiales RepID=G9YUG7_9FIRM
BMC domain protein {ECO:0000313|EMBL:EHM42336.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
microcompartments protein
L3_131_368G1_scaffold_262_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18391..19743)
DNA (1353bp) protein (451aa)
Respiratory-chain NADH dehydrogenase subunit n=2 Tax=Clostridiales RepID=U2BKA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32729.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
L3_131_368G1_scaffold_262_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19801..20085)
DNA (285bp) protein (95aa)
Putative carbon dioxide concentrating mechanism protein CcmL n=3 Tax=Clostridiales RepID=G9YUG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32730.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
carboxysome protein
L3_131_368G1_scaffold_262_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20132..20881)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54622.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_131_368G1_scaffold_262_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20918..21739)
DNA (822bp) protein (274aa)
Putative ethanolamine utilization protein EutJ n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54621.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ethanolamine utilization protein EutJ family protein
L3_131_368G1_scaffold_262_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21763..22374)
DNA (612bp) protein (204aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Phosphate propanoyltransferase n=3 Tax=Clostridiales RepID=G9YUG2_9FIRM
propanediol utilization protein
L3_131_368G1_scaffold_262_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22389..23177)
DNA (789bp) protein (263aa)
Putative ATP:cob(I)alamin adenosyltransferase n=2 Tax=Clostridiales RepID=G9YUG1_9FIRM
Putative ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:EHM42330.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
cobalamin adenosyltransferase
L3_131_368G1_scaffold_262_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23218..23502)
DNA (285bp) protein (95aa)
Major carboxysome shell protein 1A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUG0_9FIRM
Major carboxysome shell protein 1A {ECO:0000313|EMBL:EHM42329.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
microcompartments protein
L3_131_368G1_scaffold_262_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23541..23825)
DNA (285bp) protein (95aa)
Major carboxysome shell protein 1A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUF9_9FIRM
Major carboxysome shell protein 1A {ECO:0000313|EMBL:EHM42328.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
microcompartments protein
L3_131_368G1_scaffold_262_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23878..25359)
DNA (1482bp) protein (494aa)
Acetaldehyde dehydrogenase (Acetylating) n=3 Tax=Clostridiales RepID=H1CFE4_9FIRM
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:KGF54616.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
adhE_3; aldehyde-alcohol dehydrogenase
L3_131_368G1_scaffold_262_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25419..25973)
DNA (555bp) protein (185aa)
BMC domain protein n=2 Tax=Clostridiales RepID=G9YUF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54615.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
microcompartments protein
L3_131_368G1_scaffold_262_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26020..26670)
DNA (651bp) protein (217aa)
Ethanolamine utilization protein EutL n=3 Tax=Clostridiales RepID=G9YUF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54614.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
microcompartments protein
L3_131_368G1_scaffold_262_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26691..27578)
DNA (888bp) protein (296aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064961}; EC=4.3.1.7 {ECO:0000256|HAMAP-Rule:MF_00601, ECO:0000256|SAAS:SAAS00064958};; Ethanolamine ammonia-lyase small subunit {ECO:0000256|HAMAP-Rule:MF_00601}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ethanolamine ammonia-lyase light chain (EC:4.3.1.7)
Ethanolamine ammonia-lyase light chain n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUF4_9FIRM
Displaying items 1-30 of 70 in total

View Taxonomy