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L3_131_368G1_scaffold_263

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_263_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
alpha-amylase n=1 Tax=Bifidobacterium breve RepID=UPI0002E7A6EC
alpha-glucosidase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:AEF27734.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_263_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1132..1998)
DNA (867bp) protein (289aa)
MalG-type ABC sugar transport system permease component n=18 Tax=Bifidobacterium RepID=B3DP73_BIFLD
sugar ABC transporter permease
MalG-type ABC sugar transport system permease component {ECO:0000313|EMBL:ACD98932.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_131_368G1_scaffold_263_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2017..2946)
DNA (930bp) protein (310aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DB45_BIFLN
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK71398.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_131_368G1_scaffold_263_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2968..4257)
DNA (1290bp) protein (430aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUS2_BIFBR
Raffinose-binding protein
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI87803.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L3_131_368G1_scaffold_263_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4430..5638
DNA (1209bp) protein (403aa)
ROK family protein n=5 Tax=Bifidobacterium breve RepID=F6C8V6_BIFBA
Transcriptional repressor, ROK family
Uncharacterized protein {ECO:0000313|EMBL:EPD76240.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_263_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5640..7952)
DNA (2313bp) protein (771aa)
Alpha-galactosidase n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BL80_BIFBR
Alpha-galactosidase {ECO:0000313|EMBL:AEF26345.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Alpha-galactosidase
L3_131_368G1_scaffold_263_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8069..8503)
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BL81_BIFBR
tRNA-specific adenosine deaminase
L3_131_368G1_scaffold_263_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8954..11026
DNA (2073bp) protein (691aa)
Na+/H+ antiporter n=5 Tax=Bifidobacterium breve RepID=H3L261_BIFBR
Putative Na+/H+ antiporter {ECO:0000313|EMBL:EFE90071.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Na+/H+ antiporter nhaP
L3_131_368G1_scaffold_263_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11068..11871)
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C8W0_BIFBA
sulfite exporter TauE/SafE domain protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27383.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_263_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11983..12741)
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase {ECO:0000313|EMBL:AEF28123.1}; EC=3.1.-.- {ECO:0000313|EMBL:AEF28123.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Phospholipase/carboxylesterase n=2 Tax=Bifidobacterium breve RepID=F6C8W1_BIFBA
Phospholipase/carboxylesterase
L3_131_368G1_scaffold_263_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12799..13668)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C8W2_BIFBA
putative membrane spanning protein
Uncharacterized protein {ECO:0000313|EMBL:AEF27039.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_263_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14025..14606
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Deoxycytidine triphosphate deaminase n=3 Tax=Bifidobacterium breve RepID=F6C8W3_BIFBA
Deoxycytidine triphosphate deaminase
L3_131_368G1_scaffold_263_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14669..16048
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8W4_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF26784.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_263_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16138..19128)
DNA (2991bp) protein (997aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C8W5_BIFBA
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:AEF27347.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Calcium-transporting ATPase
L3_131_368G1_scaffold_263_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19289..19504
DNA (216bp) protein (72aa)
Uncharacterized protein n=6 Tax=Bifidobacterium RepID=F6C8W6_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE90079.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_263_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19497..20009)
DNA (513bp) protein (171aa)
PTS system, glucose-specific IIABC component n=5 Tax=Bifidobacterium breve RepID=F9XZW0_BIFBU
PTS system, glucose-specific IIABC component
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EPD76251.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_263_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20119..21657)
DNA (1539bp) protein (513aa)
PTS system N-acetylglucosamine-specific IIBC components n=5 Tax=Bifidobacterium RepID=B7GPD0_BIFLS
PTS system, N-acetylglucosamine-specific IIBC component
PTS system, N-acetylglucosamine-specific IIBC subunit {ECO:0000313|EMBL:ACJ53525.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_131_368G1_scaffold_263_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21950..23164)
DNA (1215bp) protein (405aa)
Transporter, major facilitator family protein n=4 Tax=Bifidobacterium breve RepID=F6C8W7_BIFBA
Transporter
Transporter {ECO:0000313|EMBL:AHJ22055.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_263_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23252..24250
DNA (999bp) protein (333aa)
RNA methyltransferase, TrmH family, group 3 n=5 Tax=Bifidobacterium breve RepID=F6C8W8_BIFBA
SpoU rRNA methylase family protein
RNA methyltransferase {ECO:0000313|EMBL:BAR00920.1}; RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFE90083.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_263_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24302..25162)
DNA (861bp) protein (287aa)
Dihydroxy-acid dehydratase n=2 Tax=Bifidobacterium breve RepID=H3L274_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD76255.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Aldose 1-epimerase family protein
L3_131_368G1_scaffold_263_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25217..26728)
DNA (1512bp) protein (504aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
galT2; Galactose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=6 Tax=Bifidobacterium RepID=F6C8X0_BIFBA
L3_131_368G1_scaffold_263_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26906..28303)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=5 Tax=Bifidobacterium breve RepID=F6C8X1_BIFBA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE96547.1}; TaxID=326426 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain NCIMB 8807 / UCC2003).;"
L3_131_368G1_scaffold_263_23
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28454..28639)
DNA (186bp) protein (62aa)
Integrase, catalytic region n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0I6_BIFBP
integrase, catalytic region
Integrase catalytic region {ECO:0000313|EMBL:CDB22344.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_131_368G1_scaffold_263_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28922..30049)
DNA (1128bp) protein (376aa)
ABC transporter, ATP-binding protein n=6 Tax=Bifidobacterium breve RepID=F6C8Y1_BIFBA
ATP-binding protein of ABC transporter system for sugars
ATP-binding protein of ABC transporter system for sugars {ECO:0000313|EMBL:AHJ22064.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_263_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30370..31110)
DNA (741bp) protein (247aa)
UbiC transcription regulator-associated domain protein n=3 Tax=Bifidobacterium breve RepID=F6C8Y2_BIFBA
Transcriptional regulator, GntR family
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:AEF27622.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
L3_131_368G1_scaffold_263_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31238..32416)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S2ZHQ3_BIFBR
PTS system, IIC component
Uncharacterized protein {ECO:0000313|EMBL:EPD76268.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L3_131_368G1_scaffold_263_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32430..32567)
DNA (138bp) protein (46aa)
PTS system, IIB component, lactose/cellobiose family n=3 Tax=Bifidobacterium breve RepID=H3L288_BIFBR
PTS system, IIB component
PTS system, IIB component {ECO:0000313|EMBL:AHJ22067.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_131_368G1_scaffold_263_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32616..33050)
DNA (435bp) protein (145aa)
PTS system, IIA component n=6 Tax=Bifidobacterium breve RepID=F9XZX5_BIFBU
PTS system, IIA component
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EFE90104.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_263_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33329..34489)
DNA (1161bp) protein (387aa)
glycosyl transferase n=1 Tax=Bifidobacterium breve RepID=UPI00030A2D1D
Glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAR00937.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L3_131_368G1_scaffold_263_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34593..35384
DNA (792bp) protein (264aa)
LytTr DNA-binding domain protein n=5 Tax=Bifidobacterium breve RepID=F6C8Y7_BIFBA
virR; Two-component response regulator virR
LytTr DNA-binding domain protein {ECO:0000313|EMBL:AEF27117.1}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Displaying items 1-30 of 75 in total

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