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L3_131_368G1_scaffold_289

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_289_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
Small GTP-binding domain protein n=1 Tax=Clostridium difficile CD212 RepID=T3HSY2_CLODI
elongation factor Tu
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_131_368G1_scaffold_289_2
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(194..856)
DNA (663bp) protein (221aa)
RNA polymerase sigma-H factor n=2 Tax=Clostridiales RepID=B0A692_9FIRM
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EDQ97986.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
sigH; RNA polymerase factor sigma-70
L3_131_368G1_scaffold_289_3

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comp(888..1448)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A691_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16893.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_131_368G1_scaffold_289_4

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comp(1448..2182)
DNA (735bp) protein (245aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ16892.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
tRNA/rRNA methyltransferase
L3_131_368G1_scaffold_289_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2195..2953)
DNA (759bp) protein (253aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
thyX; Thymidylate synthase thyX (TS) (TSase) (EC:2.1.1.148)
Thymidylate synthase ThyX n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A689_9FIRM
L3_131_368G1_scaffold_289_6
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3134..3547)
DNA (414bp) protein (138aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Mini-ribonuclease 3 n=2 Tax=Clostridiales RepID=B0A688_9FIRM
hypothetical protein
L3_131_368G1_scaffold_289_7

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comp(3532..4932)
DNA (1401bp) protein (467aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y4A6_9CLOT
Cysteine-tRNA ligase {ECO:0000313|EMBL:ETJ16889.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_368G1_scaffold_289_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5180..5998)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A686_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97980.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative membrane protein
L3_131_368G1_scaffold_289_9
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6001..6705)
DNA (705bp) protein (235aa)
Putative RNA polymerase sigma factor SigI n=2 Tax=Clostridium bartlettii DSM 16795 RepID=B0A685_9FIRM
Putative RNA polymerase sigma factor SigI {ECO:0000313|EMBL:EDQ97979.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
putative RNA polymerase sigma-I factor
L3_131_368G1_scaffold_289_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6806..7597)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A684_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97978.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_131_368G1_scaffold_289_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7540..8394)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A683_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97977.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_131_368G1_scaffold_289_12
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8411..9070)
DNA (660bp) protein (220aa)
UPI0003D66BDB related cluster n=1 Tax=unknown RepID=UPI0003D66BDB
Uncharacterized protein {ECO:0000313|EMBL:ETI94543.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
antibiotic ABC transporter ATP-binding protein
L3_131_368G1_scaffold_289_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9089..9907)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A681_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97975.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_131_368G1_scaffold_289_14
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10004..10696)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A680_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ97974.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_131_368G1_scaffold_289_15
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10689..11234)
DNA (546bp) protein (182aa)
Sigma-70 region 2 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A679_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EDQ97973.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
ECF family RNA polymerase sigma-24 subunit
L3_131_368G1_scaffold_289_16

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comp(11474..12196)
DNA (723bp) protein (241aa)
HAD hydrolase family IA variant 3 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17061.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_131_368G1_scaffold_289_17
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12183..13022)
DNA (840bp) protein (280aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
thiM; hydroxyethylthiazole kinase ThiM (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRV6_9CLOT
L3_131_368G1_scaffold_289_18

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comp(13025..13333)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A673_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17058.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_131_368G1_scaffold_289_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13487..13726)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A672_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA11498.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_131_368G1_scaffold_289_20
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14020..14448
DNA (429bp) protein (143aa)
queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase QueD (EC:4.1.2.50)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=2 Tax=Clostridiales RepID=B0A670_9FIRM
Putative queuosine biosynthesis protein QueD {ECO:0000313|EMBL:EDQ97964.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_131_368G1_scaffold_289_21

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14450..15112
DNA (663bp) protein (221aa)
queE; 7-carboxy-7-deazaguanine synthase QueE (EC:4.3.99.3)
7-carboxy-7-deazaguanine synthase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XRW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17055.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_368G1_scaffold_289_22
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15162..15836
DNA (675bp) protein (225aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
queC; 7-cyano-7-deazaguanine synthase (EC:6.3.4.20)
7-cyano-7-deazaguanine synthase n=3 Tax=Clostridiales RepID=B0A668_9FIRM
L3_131_368G1_scaffold_289_23

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15853..16356
DNA (504bp) protein (168aa)
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X7A6_9CLOT
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000313|EMBL:ETJ17053.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_131_368G1_scaffold_289_24
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16458..18077)
DNA (1620bp) protein (540aa)
Amidohydrolase family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGI8_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:CDA11504.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
amidohydrolase 3
L3_131_368G1_scaffold_289_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18126..19514)
DNA (1389bp) protein (463aa)
Amino acid permease n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9N0_9CLOT
Amino acid permease {ECO:0000313|EMBL:CDA11505.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
amino acid permease
L3_131_368G1_scaffold_289_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19811..21310
DNA (1500bp) protein (500aa)
UPF0061 protein CLOBAR_00047 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A664_9FIRM
UPF0061 protein CLOBAR_00047 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_131_368G1_scaffold_289_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21505..22752
DNA (1248bp) protein (416aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y4F1_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA11507.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
oxidoreductase
L3_131_368G1_scaffold_289_28

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comp(22832..23890)
DNA (1059bp) protein (353aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A662_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17151.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
bacterial extracellular solute-binding family protein
L3_131_368G1_scaffold_289_29
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24110..26347)
DNA (2238bp) protein (746aa)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGJ5_9CLOT
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDA11509.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycoside hydrolase family protein
L3_131_368G1_scaffold_289_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26725..27945
DNA (1221bp) protein (407aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X9N3_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA11510.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
two-component system, response regulator YesN
Displaying items 1-30 of 71 in total

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