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L3_131_368G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_293_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..698)
DNA (696bp) protein (232aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53594.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_293_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(769..1605)
DNA (837bp) protein (279aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4B7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53592.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_293_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1631..9847)
DNA (8217bp) protein (2739aa)
RHS repeat-associated core domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AWV3_9CLOT
RHS repeat-associated core domain protein {ECO:0000313|EMBL:ERI64595.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Rhs family protein
L3_131_368G1_scaffold_293_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10334..11521)
DNA (1188bp) protein (396aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BI09_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI77729.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_293_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11609..11812)
DNA (204bp) protein (68aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Clostridiales RepID=H1CKZ7_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:ERI77730.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
excisionase
L3_131_368G1_scaffold_293_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11809..12342)
DNA (534bp) protein (178aa)
Toxin-antitoxin system, toxin component, MazF family n=2 Tax=Clostridiales RepID=U2DDZ8_9CLOT
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:ERI77731.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Growth inhibitor
L3_131_368G1_scaffold_293_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12939..13460)
DNA (522bp) protein (174aa)
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG06_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EHO32284.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
RNA polymerase ECF-type sigma factor
L3_131_368G1_scaffold_293_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14057..14377)
DNA (321bp) protein (107aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DE03_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI77736.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L3_131_368G1_scaffold_293_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14433..14792)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32285.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Helix-turn-helix.
L3_131_368G1_scaffold_293_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16019..16912
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32286.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_293_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17012..17995
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32287.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_293_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18013..18435
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CG10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32288.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_293_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18470..19354
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77745.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_293_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19597..20976
DNA (1380bp) protein (460aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CN14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18851.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function DUF88.
L3_131_368G1_scaffold_293_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21893..22465
DNA (573bp) protein (191aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2BZU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77750.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_293_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22408..22698
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CK11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26441.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_131_368G1_scaffold_293_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22720..22959
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26440.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_293_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23566..24042
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D2D0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75637.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_131_368G1_scaffold_293_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24122..24580
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75636.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_131_368G1_scaffold_293_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24918..25661
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26472.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_131_368G1_scaffold_293_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25682..26668
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26471.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF3137).
L3_131_368G1_scaffold_293_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26701..27624
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26470.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Protein of unknown function (DUF1266).
L3_131_368G1_scaffold_293_23
unknown

Not on your lists

28026..28118
DNA (93bp) protein (31aa)

This feature has no annotations

L3_131_368G1_scaffold_293_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28229..28690
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CCU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81838.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_293_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28788..29162
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BUI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81839.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_293_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29261..29824
DNA (564bp) protein (188aa)
SMI1 / KNR4 family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CBD7_9CLOT
SMI1 / KNR4 family protein {ECO:0000313|EMBL:ERI81840.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative glucan synthasis protein
L3_131_368G1_scaffold_293_27
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30051..30428
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VIH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83356.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
L3_131_368G1_scaffold_293_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30515..30928
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CCV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81843.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_131_368G1_scaffold_293_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30946..31359
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BUI7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81844.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_131_368G1_scaffold_293_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31386..31826
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CBE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI81845.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 62 in total

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