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L3_131_368G1_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_306_1
unknown

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248..376
DNA (129bp) protein (43aa)

This feature has no annotations

L3_131_368G1_scaffold_306_2
unknown

Not on your lists

667..879
DNA (213bp) protein (71aa)

This feature has no annotations

L3_131_368G1_scaffold_306_3
unknown

Not on your lists

876..1613
DNA (738bp) protein (246aa)

This feature has no annotations

L3_131_368G1_scaffold_306_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1732..7008
DNA (5277bp) protein (1759aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78362.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_306_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7067..7537
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78363.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_306_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7894..10431
DNA (2538bp) protein (846aa)
Bacterial Ig-like domain (Group 2) n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LS02_9FIRM
Bacterial Ig-like domain (group 2).
Bacterial Ig-like domain (Group 2) {ECO:0000313|EMBL:CBL23560.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_131_368G1_scaffold_306_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10428..11678
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LS03_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL23561.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_131_368G1_scaffold_306_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11671..12663
DNA (993bp) protein (331aa)
ABC-type cobalt transport system permease component CbiQ and related transporters n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL6_9FIRM
ABC-type cobalt transport system permease component CbiQ and related transporters {ECO:0000313|EMBL:CDD80544.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_131_368G1_scaffold_306_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12660..14417
DNA (1758bp) protein (586aa)
ATPase components of various ABC-type transport systems contain duplicated ATPase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRB1_9FIRM
ATPase components of various ABC-type transport systems contain duplicated ATPase {ECO:0000313|EMBL:CDD80545.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_131_368G1_scaffold_306_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14396..15286
DNA (891bp) protein (297aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSC3_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDD80547.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein
L3_131_368G1_scaffold_306_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15273..17408
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80549.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_306_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17679..17945
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80550.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_306_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17983..18882
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80551.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00104
L3_131_368G1_scaffold_306_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19028..20347
DNA (1320bp) protein (440aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=2 Tax=Ruminococcus RepID=C6JCT0_9FIRM
L3_131_368G1_scaffold_306_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20733..23090
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80553.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DEAD_2.
L3_131_368G1_scaffold_306_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23216..24709
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80554.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Beta-lactamase class A
L3_131_368G1_scaffold_306_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24891..26165
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76976.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Glycerol dehydrogenase and related enzymes
L3_131_368G1_scaffold_306_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26168..26650
DNA (483bp) protein (161aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ruminococcus RepID=C6JCS6_9FIRM
L3_131_368G1_scaffold_306_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26678..28087
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSD5_9FIRM
L3_131_368G1_scaffold_306_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28072..28551
DNA (480bp) protein (160aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Mini-ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQM9_9FIRM
hypothetical protein
L3_131_368G1_scaffold_306_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28548..29285
DNA (738bp) protein (246aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F32C22
Uncharacterized protein {ECO:0000313|EMBL:CDD80560.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_306_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29441..30040
DNA (600bp) protein (200aa)
RNA polymerase sigma-H factor n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCS1_9FIRM
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EES76970.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase, sigma 30 subunit, SigH
L3_131_368G1_scaffold_306_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31130..32797
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=2 Tax=Ruminococcus RepID=C6JCR9_9FIRM
L3_131_368G1_scaffold_306_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32907..33311)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80564.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_306_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33456..34124
DNA (669bp) protein (223aa)
Maf-like protein RSAG_01734 n=2 Tax=Ruminococcus RepID=C6JCR7_9FIRM
Maf-like protein BN806_00891 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
MAF protein
L3_131_368G1_scaffold_306_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34131..34796
DNA (666bp) protein (222aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Phosphoglycolate phosphatase, bacterial n=2 Tax=Ruminococcus RepID=C6JCR6_9FIRM
Phosphoglycolate phosphatase, bacterial {ECO:0000313|EMBL:EES76965.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_131_368G1_scaffold_306_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34789..35592
DNA (804bp) protein (268aa)
Cof-like hydrolase n=2 Tax=Ruminococcus RepID=C6JCR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80567.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HAD-superfamily hydrolase, subfamily IIB
L3_131_368G1_scaffold_306_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35594..35851
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80569.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_306_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36174..38831
DNA (2658bp) protein (886aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76962.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_131_368G1_scaffold_306_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39078..41150
DNA (2073bp) protein (691aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80573.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Molecular chaperone, HSP90 family
Displaying items 1-30 of 55 in total

View Taxonomy