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L3_131_368G1_scaffold_367

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_367_1
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..168)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LRY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90826.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L3_131_368G1_scaffold_367_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

304..2382
DNA (2079bp) protein (693aa)
Leucine Rich Repeat domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VM60_9CYAN
Leucine Rich Repeat domain protein {ECO:0000313|EMBL:EDX76955.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
L3_131_368G1_scaffold_367_3
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2884..3750)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6HFN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06407.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4092..5807)
DNA (1716bp) protein (572aa)
acyl-CoA synthetase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJI4_9CLOT
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CDC06406.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5834..6406)
DNA (573bp) protein (191aa)
Transcriptional regulator TetR family n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5S8_9CLOT
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDC06405.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
transcriptional regulator, TetR family
L3_131_368G1_scaffold_367_6
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6554..7243)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06167.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_7
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7359..7694)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQ19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90869.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
hypothetical protein
L3_131_368G1_scaffold_367_8
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7789..8844)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06164.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L3_131_368G1_scaffold_367_9
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8856..9338)
DNA (483bp) protein (161aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:575 RepID=R6H6K2_9CLOT
metalloprotein, YbeY/UPF0054family
L3_131_368G1_scaffold_367_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9326..10546)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06157.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10560..11744)
DNA (1185bp) protein (395aa)
Sporulation protein YqfD n=1 Tax=Clostridium sp. CAG:343 RepID=R6NIT4_9CLOT
Sporulation protein YqfD {ECO:0000313|EMBL:CDC06156.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
yqfD; YqfD
L3_131_368G1_scaffold_367_12
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11946..12242)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:440 RepID=R7GDJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE25459.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
sporulation protein YqfC
L3_131_368G1_scaffold_367_13
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12340..13167)
DNA (828bp) protein (276aa)
Delta-lactam-biosynthetic de-N-acetylase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NCW2_9CLOT
Delta-lactam-biosynthetic de-N-acetylase {ECO:0000313|EMBL:CDC06154.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
delta-lactam-biosynthetic de-N-acetylase
L3_131_368G1_scaffold_367_14
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13639..14352
DNA (714bp) protein (238aa)
DNA-binding response regulator LytTr family n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPP2_9CLOT
DNA-binding response regulator LytTr family {ECO:0000313|EMBL:CDE90086.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
LytTr family DNA-binding response regulator
L3_131_368G1_scaffold_367_15
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14336..15682
DNA (1347bp) protein (449aa)
Histidine kinase n=1 Tax=Clostridium sp. CAG:343 RepID=R6P8D2_9CLOT
Histidine kinase {ECO:0000313|EMBL:CDC06147.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
histidine kinase
L3_131_368G1_scaffold_367_16
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15900..16019)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7M7L5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE96366.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
L3_131_368G1_scaffold_367_17
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16065..16676)
DNA (612bp) protein (204aa)
Accessory gene regulator B n=1 Tax=Clostridium sp. CAG:440 RepID=R7GF61_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:CDE25453.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Accessory gene regulator B
L3_131_368G1_scaffold_367_18
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16917..17597)
DNA (681bp) protein (227aa)
23S RNA-specific pseudouridylate synthase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FI64_9CLOT
23S RNA-specific pseudouridylate synthase {ECO:0000313|EMBL:CDE14560.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
pseudouridylate synthase
L3_131_368G1_scaffold_367_19
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17585..18469)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LPN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE90081.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
putative SAM-dependent methyltransferase
L3_131_368G1_scaffold_367_20
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18630..18842)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NJG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC06386.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_21
unknown

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comp(18984..19235)
DNA (252bp) protein (84aa)

This feature has no annotations

L3_131_368G1_scaffold_367_22
unknown

Not on your lists

19414..19587
DNA (174bp) protein (58aa)

This feature has no annotations

L3_131_368G1_scaffold_367_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19828..21621)
DNA (1794bp) protein (598aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:343 RepID=R6N306_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
uvrC; excinuclease ABC subunit C
L3_131_368G1_scaffold_367_24
unknown

Not on your lists

comp(21872..22912)
DNA (1041bp) protein (347aa)

This feature has no annotations

L3_131_368G1_scaffold_367_25
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23294..25135
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:343 RepID=R6NLF7_9CLOT
L3_131_368G1_scaffold_367_26
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25242..25502)
DNA (261bp) protein (87aa)
Pro-sigmaK processing inhibitor BofA n=1 Tax=Clostridium sp. CAG:440 RepID=R7GEK4_9CLOT
Pro-sigmaK processing inhibitor BofA {ECO:0000313|EMBL:CDE25446.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
pro-sigmaK processing inhibitor BofA
L3_131_368G1_scaffold_367_27
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25580..25873)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NFD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07084.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L3_131_368G1_scaffold_367_28
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26200..28530
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N4V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07083.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
TraG/TraD
L3_131_368G1_scaffold_367_29
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28657..29514)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6PB41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07082.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L3_131_368G1_scaffold_367_30
Clostridium sp. CAG:575, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29701..30393)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:575 RepID=R6I3M5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB32672.1}; TaxID=1262823 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:575.;"
Displaying items 1-30 of 55 in total

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