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L3_131_368G1_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_376_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31..285)
DNA (255bp) protein (85aa)
Heavy metal-associated domain protein n=2 Tax=Clostridiales RepID=G9YV65_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERI65012.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Copper chaperone
L3_131_368G1_scaffold_376_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(369..854)
DNA (486bp) protein (162aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
Formate dehydrogenase subunit gamma family protein n=2 Tax=Clostridiales RepID=U2B008_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25919.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_376_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(851..1093)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L3_131_368G1_scaffold_376_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1056..1958)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=3 Tax=Clostridiales RepID=H1CK79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25918.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ribosome small subunit-dependent GTPase A
L3_131_368G1_scaffold_376_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2073..2357)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52778.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_376_6
unknown

Not on your lists

2578..2775
DNA (198bp) protein (66aa)

This feature has no annotations

L3_131_368G1_scaffold_376_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2807..3265
DNA (459bp) protein (153aa)
Toxin-antitoxin system, antitoxin component, Xre domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAW3_9CLOT
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:ERI62949.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative Xre family DNA-binding protein
L3_131_368G1_scaffold_376_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3343..3576)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AU77_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25915.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_376_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3743..4162
DNA (420bp) protein (140aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridiales RepID=G9YV72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25914.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulators
L3_131_368G1_scaffold_376_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4159..5913
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25913.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter
L3_131_368G1_scaffold_376_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5888..7732
DNA (1845bp) protein (615aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AS50_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI62945.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type multidrug transport system, ATPase and permease components
L3_131_368G1_scaffold_376_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7820..8206
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27894.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative DtxR family transcriptional regulator
L3_131_368G1_scaffold_376_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8263..8682)
DNA (420bp) protein (140aa)
Flavodoxin n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ04_9FIRM
Flavodoxin {ECO:0000313|EMBL:KGF52022.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_376_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8733..9296)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF52023.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_376_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9585..10520
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
tRNA-dihydrouridine synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV80_9FIRM
dihydrouridine synthase family protein
L3_131_368G1_scaffold_376_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10525..11595
DNA (1071bp) protein (357aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV81_9FIRM
L3_131_368G1_scaffold_376_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11647..12540
DNA (894bp) protein (298aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Putative glutamyl-queuosine tRNA(Asp) synthetase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV82_9FIRM
Putative glutamyl-queuosine tRNA(Asp) synthetase {ECO:0000313|EMBL:EHM40803.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_131_368G1_scaffold_376_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12600..13646)
DNA (1047bp) protein (349aa)
GroES-like protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV83_9FIRM
GroES-like protein {ECO:0000313|EMBL:EHM40804.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_131_368G1_scaffold_376_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13652..14230)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51980.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_376_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14332..17238
DNA (2907bp) protein (969aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
TIGR00375 family protein n=2 Tax=Clostridiales RepID=U2CVS3_9CLOT
hypothetical protein
L3_131_368G1_scaffold_376_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17318..18718)
DNA (1401bp) protein (467aa)
Putative HTH-type transcriptional regulatory protein GabR n=3 Tax=Clostridiales RepID=G9YV87_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:EHM40808.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
transcriptional regulator
L3_131_368G1_scaffold_376_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18914..19684
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=3 Tax=Clostridiales RepID=G9YV88_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative RNA polymerase sigma factor
L3_131_368G1_scaffold_376_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20215..21297
DNA (1083bp) protein (361aa)
TIGR00300 family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YV90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51985.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_131_368G1_scaffold_376_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21352..22299)
DNA (948bp) protein (316aa)
Transporter, auxin efflux carrier family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF51986.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted permeases
L3_131_368G1_scaffold_376_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22435..22698
DNA (264bp) protein (88aa)
Sporulation protein, YlmC/YmxH family n=3 Tax=Clostridiales RepID=G9YKS0_9FIRM
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:EHO27879.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
YlmC/YmxH family sporulation protein
L3_131_368G1_scaffold_376_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22766..24598
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CQH6_9CLOT
L3_131_368G1_scaffold_376_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24610..26175
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27877.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type dipeptide transport system, periplasmic component
L3_131_368G1_scaffold_376_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26264..27217
DNA (954bp) protein (318aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BH35_9CLOT
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:ERI71505.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC transporter permease
L3_131_368G1_scaffold_376_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27234..28091
DNA (858bp) protein (286aa)
Putative oligopeptide ABC transporter, permease protein AppC n=2 Tax=Clostridiales RepID=U2B045_9CLOT
Putative oligopeptide ABC transporter, permease protein AppC {ECO:0000313|EMBL:ERI71504.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_131_368G1_scaffold_376_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28205..29806
DNA (1602bp) protein (534aa)
TrkA protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YKS5_9FIRM
TrkA protein {ECO:0000313|EMBL:EHM55261.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sodium/hydrogen exchanger
Displaying items 1-30 of 56 in total

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