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L3_131_368G1_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_403_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..400
DNA (399bp) protein (133aa)
Cell wall-binding repeat protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AIX8_9CLOT
Cell wall-binding repeat protein {ECO:0000313|EMBL:EFC98239.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
cell wall binding repeat-containing protein
L3_131_368G1_scaffold_403_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

906..4211
DNA (3306bp) protein (1102aa)
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Superfamily I DNA and RNA helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DH89_CLOSC
L3_131_368G1_scaffold_403_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4342..5010)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42448.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
copper amine oxidase-like domain-containing protein
L3_131_368G1_scaffold_403_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5003..5686)
DNA (684bp) protein (228aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2V0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY94082.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
RNA polymerase sigma factor sigma-70 family protein
L3_131_368G1_scaffold_403_5
unknown

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comp(5869..6249)
DNA (381bp) protein (127aa)

This feature has no annotations

L3_131_368G1_scaffold_403_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6372..7016)
DNA (645bp) protein (215aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUS2_9CLOT
pyroglutamyl-peptidase I
L3_131_368G1_scaffold_403_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7160..8092)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44073.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_403_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8094..8789)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J595_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44072.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_403_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9026..10696
DNA (1671bp) protein (557aa)
Uncharacterized protein n=8 Tax=Clostridium clostridioforme RepID=N9XEL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13665.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC-type dipeptide transport system, periplasmic component
L3_131_368G1_scaffold_403_10
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10776..11777
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62808.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_131_368G1_scaffold_403_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11764..12822
DNA (1059bp) protein (353aa)
Oligopeptide ABC transporter, ATP-binding protein AppF n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ET17_9FIRM
Oligopeptide ABC transporter, ATP-binding protein AppF {ECO:0000313|EMBL:EEQ61161.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptide ABC transporter substrate-binding protein
L3_131_368G1_scaffold_403_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12819..13766
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RXW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14423.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_131_368G1_scaffold_403_13
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13781..14695
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHJ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98835.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_131_368G1_scaffold_403_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14989..15306
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4X7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44071.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_403_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15427..15849
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 IPR6_9CLOT">RepID=R5IPR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44070.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_403_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15871..16632
DNA (762bp) protein (254aa)
ATP synthase F0 subcomplex A subunit (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUR7_9CLOT
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16681..16962
DNA (282bp) protein (94aa)
ATP synthase F0 subcomplex C subunit (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI6_9CLOT
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17005..17511
DNA (507bp) protein (169aa)
ATP synthase F0 subcomplex B subunit (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Clostridium sp. CAG:7 RepID=R5J590_9CLOT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17508..18047
DNA (540bp) protein (180aa)
ATP synthase F1 subcomplex delta subunit (EC:3.6.3.14)
ATP synthase subunit delta n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4X3_9CLOT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18062..19582
DNA (1521bp) protein (507aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Clostridium sp. CAG:7 IPR1_9CLOT">RepID=R5IPR1_9CLOT
L3_131_368G1_scaffold_403_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19604..20461
DNA (858bp) protein (286aa)
ATP synthase F1 subcomplex gamma subunit (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUR4_9CLOT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20559..21956
DNA (1398bp) protein (466aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP synthase F1 subcomplex beta subunit (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPI3_9CLOT
L3_131_368G1_scaffold_403_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21975..22385
DNA (411bp) protein (137aa)
ATP synthase F1 subcomplex epsilon subunit (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5J585_9CLOT
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22542..23687
DNA (1146bp) protein (382aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHG9_9CLOT
Sua5/YciO/YrdC/YwlC family protein
L3_131_368G1_scaffold_403_25
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23844..27704)
DNA (3861bp) protein (1287aa)
Exo-poly-alpha-galacturonosidase (EC:3.2.1.82)
Exopolygalacturonate lyase n=2 Tax=Clostridium RepID=R5T2D6_9CLOT
Exopolygalacturonate lyase {ECO:0000313|EMBL:CCZ60170.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_131_368G1_scaffold_403_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27981..28520
DNA (540bp) protein (180aa)
Multimeric flavodoxin WrbA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K5J4_9FIRM
Multimeric flavodoxin WrbA
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CBL02853.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_131_368G1_scaffold_403_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28809..29819)
DNA (1011bp) protein (337aa)
Adenosine deaminase {ECO:0000313|EMBL:EEQ60134.1}; EC=3.5.4.4 {ECO:0000313|EMBL:EEQ60134.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
adenosine deaminase (EC:3.5.4.4)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036F7400
L3_131_368G1_scaffold_403_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30144..30638
DNA (495bp) protein (165aa)
dCMP deaminase (EC:3.5.4.12)
Putative deoxycytidylate deaminase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUQ5_9CLOT
Putative deoxycytidylate deaminase {ECO:0000313|EMBL:CCY44049.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_131_368G1_scaffold_403_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30644..32587
DNA (1944bp) protein (648aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DA98_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EEG51730.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_131_368G1_scaffold_403_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32566..34800
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VTR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93939.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transcriptional regulator
Displaying items 1-30 of 111 in total

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