ggKbase home page

L3_131_368G1_scaffold_451

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_451_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..831)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5US34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ78524.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_451_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(967..1875)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98831.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transposase DDE domain.
L3_131_368G1_scaffold_451_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2264..2884
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79599.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cytidylate kinase
L3_131_368G1_scaffold_451_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2888..4408
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76393.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Amino acid transporters
L3_131_368G1_scaffold_451_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4520..5704
DNA (1185bp) protein (395aa)
Alcohol dehydrogenase, class IV (EC:1.1.1.1)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98756.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_131_368G1_scaffold_451_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5974..6630
DNA (657bp) protein (219aa)
RNAse H family protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMX3_9FIRM
RNAse H family protein {ECO:0000313|EMBL:CDD79594.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Ribonuclease HI
L3_131_368G1_scaffold_451_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6820..7911)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79592.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted membrane protein, putative toxin regulator
L3_131_368G1_scaffold_451_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8256..8891
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF36_9FIRM
Integral membrane protein {ECO:0000313|EMBL:CDD79590.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
integral membrane protein
L3_131_368G1_scaffold_451_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8971..9840)
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW9_9FIRM
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDD79589.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_451_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9860..10528)
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ44_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDD79588.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_131_368G1_scaffold_451_11
unknown

Not on your lists

10857..10991
DNA (135bp) protein (45aa)

This feature has no annotations

L3_131_368G1_scaffold_451_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11287..12681
DNA (1395bp) protein (465aa)
Magnesium transporter n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF33_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mg2+ transporter (mgtE)
L3_131_368G1_scaffold_451_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13252..14982
DNA (1731bp) protein (577aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF32_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES76379.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
diguanylate cyclase (GGDEF) domain
L3_131_368G1_scaffold_451_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14982..15926
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76378.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L3_131_368G1_scaffold_451_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16426..17370
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76377.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_131_368G1_scaffold_451_16
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17367..18233
DNA (867bp) protein (289aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW5_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79584.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_131_368G1_scaffold_451_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18268..19806
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76375.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type dipeptide transport system, periplasmic component
L3_131_368G1_scaffold_451_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19905..20699
DNA (795bp) protein (265aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG2_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79582.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_131_368G1_scaffold_451_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20696..21457
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76373.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_131_368G1_scaffold_451_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21531..22217)
DNA (687bp) protein (229aa)
FCD domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D9X5_9FIRM
FCD domain protein {ECO:0000313|EMBL:ERI93133.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
transcriptional regulator, GntR family
L3_131_368G1_scaffold_451_21
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22500..23855
DNA (1356bp) protein (452aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Blautia sp. KLE 1732 RepID=U2CRK0_9FIRM
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:ERI93134.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
gluconate:H+ symporter, GntP family
L3_131_368G1_scaffold_451_22
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23868..24104
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2D8M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI93135.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_451_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24167..25912
DNA (1746bp) protein (582aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Putative dihydroxy-acid dehydratase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EJS4_9FIRM
Putative dihydroxy-acid dehydratase {ECO:0000313|EMBL:ERI93136.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_131_368G1_scaffold_451_24
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25915..26967
DNA (1053bp) protein (351aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase, PfkB family n=1 Tax=Blautia sp. KLE 1732 RepID=U2EF29_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:ERI93137.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_131_368G1_scaffold_451_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26974..27633
DNA (660bp) protein (220aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VGJ0_9FIRM
Putative KHG/KDPG aldolase {ECO:0000313|EMBL:ERI93138.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_131_368G1_scaffold_451_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28067..28609)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79580.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_131_368G1_scaffold_451_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28648..29580)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permeases
L3_131_368G1_scaffold_451_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30022..31299
DNA (1278bp) protein (426aa)
UPF0597 protein RSAG_02535 n=2 Tax=Ruminococcus RepID=C6JF18_9FIRM
UPF0597 protein RSAG_02535 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine dehydratase subunit alpha
L3_131_368G1_scaffold_451_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31735..32361
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78875.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_131_368G1_scaffold_451_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32363..33220
DNA (858bp) protein (286aa)
Drug/metabolite transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLI5_9FIRM
Drug/metabolite transporter {ECO:0000313|EMBL:CDD78876.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 63 in total

View Taxonomy