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L3_131_368G1_scaffold_634

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_634_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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479..1669
DNA (1191bp) protein (397aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
trpB; tryptophan synthase beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5J480_9CLOT
L3_131_368G1_scaffold_634_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1662..2444
DNA (783bp) protein (261aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5INH8_9CLOT
L3_131_368G1_scaffold_634_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2491..3276
DNA (786bp) protein (262aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
trpC; indole-3-glycerol phosphate synthase (EC:4.1.1.48)
indole-3-glycerol-phosphate synthase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000366F56B
L3_131_368G1_scaffold_634_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3795..4604
DNA (810bp) protein (270aa)
Acyl-ACP thioesterase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVF6_9FIRM
Acyl-ACP thioesterase {ECO:0000313|EMBL:EEQ62000.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
acyl-ACP thioesterase
L3_131_368G1_scaffold_634_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4662..5495
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J485_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43722.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA binding S1 domain-containing protein
L3_131_368G1_scaffold_634_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5555..6511
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5INI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43723.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_634_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6705..7817
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43724.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter
L3_131_368G1_scaffold_634_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7972..9060
DNA (1089bp) protein (363aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RIK7_9CLOT
CdaR family transcriptional regulator {ECO:0000313|EMBL:ENZ34084.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
CdaR family transcriptional regulator
L3_131_368G1_scaffold_634_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9076..9747
DNA (672bp) protein (224aa)
Cell division ATP-binding protein FtsE n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3W5_9CLOT
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCY43726.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell division ATP-binding protein FtsE
L3_131_368G1_scaffold_634_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9922..10689
DNA (768bp) protein (256aa)
Cell division protein FtsX n=1 Tax=Clostridium sp. CAG:7 RepID=R5J491_9CLOT
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_634_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10732..11994
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95213.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Membrane-bound metallopeptidase
L3_131_368G1_scaffold_634_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12092..12334
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HTP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95212.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
carboxyl-terminal protease
L3_131_368G1_scaffold_634_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12294..13370
DNA (1077bp) protein (359aa)
Peptidase, S41 family {ECO:0000313|EMBL:EEQ61991.1}; EC=3.4.21.- {ECO:0000313|EMBL:EEQ61991.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Peptidase, S41 family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EVE7_9FIRM
carboxyl-terminal protease
L3_131_368G1_scaffold_634_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13608..15095
DNA (1488bp) protein (496aa)
ATP-dependent Lon protease, bacterial type (EC:3.4.21.53)
ATP-dependent Lon protease bacterial type n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P740_9FIRM
ATP-dependent Lon protease bacterial type {ECO:0000313|EMBL:CDC14331.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_131_368G1_scaffold_634_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15139..16398)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44135.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_634_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16506..17318)
DNA (813bp) protein (271aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENS1_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ59801.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L3_131_368G1_scaffold_634_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17311..18078)
DNA (768bp) protein (256aa)
NitT/TauT family ABC transporter ATP-binding protein n=2 Tax=Clostridium clostridioforme RepID=N9Y417_9CLOT
NitT/TauT family ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ06648.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L3_131_368G1_scaffold_634_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18189..19742)
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44124.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_131_368G1_scaffold_634_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20064..20504
DNA (441bp) protein (147aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S563_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP12553.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
histidine triad (HIT) protein
L3_131_368G1_scaffold_634_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20619..21905
DNA (1287bp) protein (429aa)
D-alanyl-D-alanine carboxypeptidase DacF {ECO:0000313|EMBL:KJJ68158.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KJJ68158.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HF59_9CLOT
L3_131_368G1_scaffold_634_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22020..22574)
DNA (555bp) protein (185aa)
NitT/TauT family ABC transporter substrate-binding protein n=9 Tax=Clostridium RepID=N9W3A3_9CLOT
NitT/TauT family ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ06636.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
L3_131_368G1_scaffold_634_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22593..24461)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FAV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06448.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Site-specific recombinase
L3_131_368G1_scaffold_634_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24537..24731)
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2C9D1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75306.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_131_368G1_scaffold_634_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24901..25566)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZVI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM86411.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Predicted membrane protein
L3_131_368G1_scaffold_634_25
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25569..25943)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HWL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32504.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Transcriptional regulators
L3_131_368G1_scaffold_634_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25991..26752)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47977.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_131_368G1_scaffold_634_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26772..27614)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XC22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47978.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nfs; putative nitroreductase Nfs
L3_131_368G1_scaffold_634_28
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27840..28277
DNA (438bp) protein (146aa)
Rrf2 family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CVV5_9CLOT
Rrf2 family protein {ECO:0000313|EMBL:CDA75596.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
RRF2 family protein
L3_131_368G1_scaffold_634_29
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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28591..29220
DNA (630bp) protein (210aa)
Putative NAD-binding protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZT3_9FIRM
Putative NAD-binding protein {ECO:0000313|EMBL:CDB30993.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
putative NADH-flavin reductase
L3_131_368G1_scaffold_634_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29328..30149
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65424.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Appr-1-p processing domain-containing protein
Displaying items 1-30 of 71 in total

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