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L3_131_368G1_scaffold_877

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_877_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..430
DNA (429bp) protein (143aa)
Transposase, IS605 OrfB family (Fragment) n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWN1_9FIRM
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDM85909.1}; Flags: Fragment;; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
transposase IS605
L3_131_368G1_scaffold_877_2
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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651..2153
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HRL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18049.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
hypothetical protein
L3_131_368G1_scaffold_877_3
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2306..3016
DNA (711bp) protein (237aa)
Sortase SrtB family n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GKX4_9FIRM
Sortase SrtB family {ECO:0000313|EMBL:CDE27423.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
sortase
L3_131_368G1_scaffold_877_4
unknown

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comp(3028..3522)
DNA (495bp) protein (165aa)

This feature has no annotations

L3_131_368G1_scaffold_877_5
unknown

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comp(3614..4321)
DNA (708bp) protein (236aa)

This feature has no annotations

L3_131_368G1_scaffold_877_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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4453..4866
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58201.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Bacterial membrane flanked domain.
L3_131_368G1_scaffold_877_7
unknown

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4859..5185
DNA (327bp) protein (109aa)

This feature has no annotations

L3_131_368G1_scaffold_877_8
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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5216..6364
DNA (1149bp) protein (383aa)
Cell wall-binding repeat protein n=2 Tax=Oribacterium sp. oral taxon 078 RepID=D4CJ50_9FIRM
Putative cell wall binding protein {ECO:0000313|EMBL:ETP73458.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
Putative cell wall binding repeat.
L3_131_368G1_scaffold_877_9
unknown

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6454..6639
DNA (186bp) protein (62aa)

This feature has no annotations

L3_131_368G1_scaffold_877_10
unknown

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comp(6673..7068)
DNA (396bp) protein (132aa)
Heat shock protein Hsp20 n=2 Tax=Lactobacillus buchneri RepID=F4FX27_LACBN
hsp1; molecular chaperone, small heat shock protein
L3_131_368G1_scaffold_877_11
unknown

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7196..8989
DNA (1794bp) protein (598aa)

This feature has no annotations

L3_131_368G1_scaffold_877_12
unknown

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9106..9309
DNA (204bp) protein (68aa)

This feature has no annotations

L3_131_368G1_scaffold_877_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9327..10469
DNA (1143bp) protein (381aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VY28_9CLOT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDO59456.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_131_368G1_scaffold_877_14
unknown

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comp(10521..10802)
DNA (282bp) protein (94aa)

This feature has no annotations

L3_131_368G1_scaffold_877_15
unknown

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11095..11739
DNA (645bp) protein (215aa)

This feature has no annotations

L3_131_368G1_scaffold_877_16
unknown

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11810..12325
DNA (516bp) protein (172aa)

This feature has no annotations

L3_131_368G1_scaffold_877_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12468..16676
DNA (4209bp) protein (1403aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
dnaE2; DNA polymerase III E DnaE2 (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium sp. L2-50 RepID=A7VCL1_9CLOT
L3_131_368G1_scaffold_877_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16839..17678
DNA (840bp) protein (280aa)
Single-stranded DNA binding protein Ssb2 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NJN7_9CLOT
Single-stranded DNA binding protein Ssb2 {ECO:0000313|EMBL:CDC11435.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
ssb2; single-stranded DNA binding protein Ssb2
L3_131_368G1_scaffold_877_19
unknown

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17771..18001
DNA (231bp) protein (77aa)

This feature has no annotations

L3_131_368G1_scaffold_877_20
unknown

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18003..19277
DNA (1275bp) protein (425aa)

This feature has no annotations

L3_131_368G1_scaffold_877_21
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19287..19886
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00035D22F8
hypothetical protein
Bacillus thuringiensis serovar morrisoni strain HD 600 BG10.Contig244, whole genome shotgun sequence {ECO:0000313|EMBL:KIP22827.1}; TaxID=1441 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis subsp. morrisoni.;"
L3_131_368G1_scaffold_877_22
unknown

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19941..20552
DNA (612bp) protein (204aa)

This feature has no annotations

L3_131_368G1_scaffold_877_23
unknown

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20646..21446
DNA (801bp) protein (267aa)

This feature has no annotations

L3_131_368G1_scaffold_877_24
unknown

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21513..21992
DNA (480bp) protein (160aa)

This feature has no annotations

L3_131_368G1_scaffold_877_25
unknown

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22041..23294
DNA (1254bp) protein (418aa)
3''''-5'''' exonuclease n=1 Tax=Ruegeria conchae RepID=UPI000237B505
L3_131_368G1_scaffold_877_26
unknown

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comp(23316..23678)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B6D949
L3_131_368G1_scaffold_877_27
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23766..24563)
DNA (798bp) protein (266aa)
Sortase, SrtB family n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EVF0_CLOS4
Sortase, SrtB family {ECO:0000313|EMBL:ERI98832.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_131_368G1_scaffold_877_28
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24690..26462
DNA (1773bp) protein (591aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNS6_9CLOT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDC11437.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
phosphoesterase RecJ domain protein
L3_131_368G1_scaffold_877_29
unknown

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26466..27122
DNA (657bp) protein (219aa)

This feature has no annotations

L3_131_368G1_scaffold_877_30
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27653..29539
DNA (1887bp) protein (629aa)
Uncharacterized protein n=2 Tax=Oribacterium RepID=G9WQ17_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL10450.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
SMC domain protein
Displaying items 1-30 of 44 in total

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