ggKbase home page

L3_131_368G1_scaffold_1369

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1369_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..86
DNA (84bp) protein (28aa)
Recombinase n=2 Tax=Oscillibacter RepID=U2R8L4_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Uncharacterized protein {ECO:0000313|EMBL:EIY99022.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_131_368G1_scaffold_1369_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83..424)
DNA (342bp) protein (114aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6B0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46671.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
conserved hypothetical protein, ribA/ribD-fused
L3_131_368G1_scaffold_1369_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(502..2496)
DNA (1995bp) protein (665aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=4 Tax=root RepID=B0G6B1_9FIRM
L3_131_368G1_scaffold_1369_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2773..3027
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=root RepID=B0G6B2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI98283.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_1369_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3101..3349
DNA (249bp) protein (83aa)
Transcriptional regulatory protein, C-terminal domain protein n=3 Tax=Clostridiales RepID=B0G6B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23089.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_131_368G1_scaffold_1369_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3444..4118
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23090.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_131_368G1_scaffold_1369_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4088..5308
DNA (1221bp) protein (407aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Lachnospiraceae RepID=B0G6B5_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_131_368G1_scaffold_1369_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5379..6443
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=root RepID=B0G6B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96095.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_1369_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6440..7096
DNA (657bp) protein (219aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7FZY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23093.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_131_368G1_scaffold_1369_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7101..7973
DNA (873bp) protein (291aa)
ABC transporter, ATP-binding protein n=5 Tax=Clostridiales RepID=B0G6B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23094.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L3_131_368G1_scaffold_1369_11
unknown

Not on your lists

8001..8123
DNA (123bp) protein (41aa)

This feature has no annotations

L3_131_368G1_scaffold_1369_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8144..9262)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=2 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77578.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
putative transposase
L3_131_368G1_scaffold_1369_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9715..10116
DNA (402bp) protein (134aa)
Transcriptional regulatory protein, C-terminal domain protein n=6 Tax=root RepID=B0G6B9_9FIRM
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDR46680.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
two-component response regulator
L3_131_368G1_scaffold_1369_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10149..10433)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23096.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_131_368G1_scaffold_1369_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10489..11097)
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=root RepID=B0G6C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23097.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_131_368G1_scaffold_1369_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..11474)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=root RepID=K1TG81_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDE20093.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_131_368G1_scaffold_1369_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..12042)
DNA (588bp) protein (196aa)
Uncharacterized protein n=6 Tax=root RepID=R7G268_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23099.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_131_368G1_scaffold_1369_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12039..12287)
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23100.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_131_368G1_scaffold_1369_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12307..12825)
DNA (519bp) protein (173aa)
Transcriptional regulator, AbrB family n=7 Tax=root RepID=B0G6C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23101.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
looped-hinge helix DNA binding domain, AbrB family
L3_131_368G1_scaffold_1369_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12888..13574)
DNA (687bp) protein (229aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97682.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_1369_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13591..15708)
DNA (2118bp) protein (706aa)
von Willebrand factor type A domain protein n=5 Tax=Clostridiales RepID=B0G6C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23103.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Nitric oxide reductase activation protein
L3_131_368G1_scaffold_1369_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15705..15971)
DNA (267bp) protein (89aa)
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=B0G6C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23104.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_131_368G1_scaffold_1369_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15981..17792)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=8 Tax=root RepID=B0G6C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23105.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
MoxR-like ATPases
L3_131_368G1_scaffold_1369_24
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17809..18585)
DNA (777bp) protein (259aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97678.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_1369_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18727..19428)
DNA (702bp) protein (234aa)
Single-strand binding family protein n=5 Tax=Clostridiales RepID=B0G6D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23107.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Single-strand binding protein family.
L3_131_368G1_scaffold_1369_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19763..20452
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=B0G6D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23108.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_131_368G1_scaffold_1369_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20539..21456
DNA (918bp) protein (306aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridiales RepID=R7FXU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23109.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L3_131_368G1_scaffold_1369_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21449..22300
DNA (852bp) protein (284aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=B0G6D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97674.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_131_368G1_scaffold_1369_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22301..23197
DNA (897bp) protein (299aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=6 Tax=root RepID=B0G6D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23111.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Signal transduction histidine kinase
L3_131_368G1_scaffold_1369_30
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23235..23609
DNA (375bp) protein (125aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97672.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Displaying items 1-30 of 35 in total

View Taxonomy