ggKbase home page

L3_131_368G1_scaffold_1606

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1606_1
unknown

Not on your lists

105..437
DNA (333bp) protein (111aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_2
unknown

Not on your lists

430..825
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridium clostridioforme RepID=R0A7I9_9CLOT
L3_131_368G1_scaffold_1606_3
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(879..1040)
DNA (162bp) protein (54aa)
lysozyme n=1 Tax=Dickeya zeae RepID=UPI0002D5C5A2
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:AJC66473.1}; TaxID=1427366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae EC1.;"
L3_131_368G1_scaffold_1606_4
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

Not on your lists

1192..1716
DNA (525bp) protein (175aa)
Chromosome undetermined scaffold_37, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0D3Y9_PARTE
Chromosome undetermined scaffold_37, whole genome shotgun sequence {ECO:0000313|EMBL:CAK77756.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium.;" source="Paramecium tetraurelia.;"
L3_131_368G1_scaffold_1606_5
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

1801..2397
DNA (597bp) protein (199aa)
Nicotinamide mononucleotide transporter PnuC id=4420286 bin=GWF2_Lentisphaerae_50_93 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
pnuC; nicotinamide mononucleotide transporter
Tax=GWF2_Lentisphaerae_50_93_curated
L3_131_368G1_scaffold_1606_6
unknown

Not on your lists

2384..3058
DNA (675bp) protein (225aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3073..4362
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Adenylosuccinate synthetase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E634_9FIRM
L3_131_368G1_scaffold_1606_8
RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4375..5736
DNA (1362bp) protein (454aa)
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated
L3_131_368G1_scaffold_1606_9
unknown

Not on your lists

5977..6408
DNA (432bp) protein (144aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_10
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6433..7656)
DNA (1224bp) protein (408aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03887.1}; EC=2.4.2.30 {ECO:0000313|EMBL:KIR03887.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE64_9CLOT
poly(ADP-ribose) polymerase-like protein
L3_131_368G1_scaffold_1606_11
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7671..8108)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00292.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_131_368G1_scaffold_1606_12
unknown

Not on your lists

8250..8405
DNA (156bp) protein (52aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8436..9089)
DNA (654bp) protein (218aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJ06_9CLOT
diguanylate cyclase (GGDEF) domain-containing protein
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGF57914.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_131_368G1_scaffold_1606_14
unknown

Not on your lists

9210..9407
DNA (198bp) protein (66aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_15
unknown

Not on your lists

9422..10189
DNA (768bp) protein (256aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_16
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10295..10966
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72191.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Uncharacterised protein family (UPF0153).
L3_131_368G1_scaffold_1606_17
unknown

Not on your lists

11086..11337
DNA (252bp) protein (84aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_18
unknown

Not on your lists

11421..11999
DNA (579bp) protein (193aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_19
unknown

Not on your lists

12377..13339
DNA (963bp) protein (321aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_20
unknown

Not on your lists

13421..13684
DNA (264bp) protein (88aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_21
unknown

Not on your lists

13686..13961
DNA (276bp) protein (92aa)

This feature has no annotations

L3_131_368G1_scaffold_1606_22
unknown

Not on your lists

14113..14208
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 22 items

View Taxonomy