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L3_131_368G1_scaffold_1689

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1689_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..353
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B753_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30923.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_131_368G1_scaffold_1689_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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350..910
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11915.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_131_368G1_scaffold_1689_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1154..1738)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12058.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_131_368G1_scaffold_1689_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1750..2271)
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YW99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12057.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_131_368G1_scaffold_1689_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2310..2747)
DNA (438bp) protein (146aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium RepID=A7VE16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12056.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
putative transcriptional regulator
L3_131_368G1_scaffold_1689_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2946..4184
DNA (1239bp) protein (413aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XA21_9CLOT
L3_131_368G1_scaffold_1689_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4199..4741
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12054.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_131_368G1_scaffold_1689_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4757..4960
DNA (204bp) protein (68aa)
LexA DNA binding domain protein n=2 Tax=Clostridium RepID=A7VE13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12053.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
lexA3; LexA DNA binding domain-containing protein
L3_131_368G1_scaffold_1689_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5280..5723
DNA (444bp) protein (148aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Clostridium RepID=A7VE12_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENZ12052.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
FliA/WhiG subfamily RNA polymerase sigma-28 subunit
L3_131_368G1_scaffold_1689_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6359..6613
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12051.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_131_368G1_scaffold_1689_11
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6699..7019
DNA (321bp) protein (107aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
mRNA interferase n=1 Tax=Clostridium sp. L2-50 RepID=A7VE09_9CLOT
transcriptional regulator
L3_131_368G1_scaffold_1689_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7051..7398
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XA16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12050.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
resolvase-like protein
L3_131_368G1_scaffold_1689_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7420..7815
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YUX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12049.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_131_368G1_scaffold_1689_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7841..7954
DNA (114bp) protein (38aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12048.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_131_368G1_scaffold_1689_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8058..9176
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YW85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12047.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_1689_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9115..9234
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X9Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12046.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_131_368G1_scaffold_1689_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9194..11170
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XA10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12045.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_1689_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11121..12653
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YUW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12044.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Phage integrase family.
L3_131_368G1_scaffold_1689_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12643..13065
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE02_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58005.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_131_368G1_scaffold_1689_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13081..13455
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58004.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_131_368G1_scaffold_1689_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13452..13820
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VE00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58003.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_131_368G1_scaffold_1689_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13932..14741
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75400.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transposase, IS4
Displaying 22 items

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