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L3_131_368G1_scaffold_2022

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_2022_1
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..333
DNA (333bp) protein (111aa)
neuB1; N-acetylneuraminate synthase (EC:2.5.1.56)
N-acetylneuraminate synthase NeuB1 {ECO:0000313|EMBL:ADL33176.1}; EC=2.5.1.56 {ECO:0000313|EMBL:ADL33176.1};; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
N-acetylneuraminate synthase NeuB1 n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RZH9_BUTPB
L3_131_368G1_scaffold_2022_2
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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330..1502
DNA (1173bp) protein (391aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0FBL6_DESDL
UDP-N-acetyl-D-glucosamine 2-epimerase
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing {ECO:0000313|EMBL:AGA70602.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L3_131_368G1_scaffold_2022_3
unknown

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1492..1641
DNA (150bp) protein (50aa)

This feature has no annotations

L3_131_368G1_scaffold_2022_4
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2173..2868
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42921.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
acylneuraminate cytidylyltransferase
L3_131_368G1_scaffold_2022_5
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2914..3246
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80257.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
GFO/IDH/MOCA family oxidoreductase
L3_131_368G1_scaffold_2022_6
unknown

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comp(3290..3412)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_131_368G1_scaffold_2022_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3640..4032)
DNA (393bp) protein (131aa)
Histidine triad domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E3_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EEF68101.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Histidine triad (HIT) nucleotide-binding protein
L3_131_368G1_scaffold_2022_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4046..5152)
DNA (1107bp) protein (369aa)
4Fe-4S binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E4_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEF68102.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Uncharacterized Fe-S center protein
L3_131_368G1_scaffold_2022_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5362..6225)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68103.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_2022_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6225..7322)
DNA (1098bp) protein (366aa)
PPIC-type PPIASE domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E6_9FIRM
PPIC-type PPIASE domain protein {ECO:0000313|EMBL:EEF68104.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
prsA; peptidyl-prolyl isomerase
L3_131_368G1_scaffold_2022_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7592..8419
DNA (828bp) protein (276aa)
FeS assembly ATPase SufC n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E8_9FIRM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EEF68106.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
FeS assembly ATPase SufC
L3_131_368G1_scaffold_2022_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8412..9251
DNA (840bp) protein (280aa)
SufB/sufD domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7E9_9FIRM
SufB/sufD domain protein {ECO:0000313|EMBL:EEF68107.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
sufD; putative SUF system FeS cluster assembly protein SufD
L3_131_368G1_scaffold_2022_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9266..10462
DNA (1197bp) protein (399aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Cysteine desulfurase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F0_9FIRM
cysteine desulfurase
L3_131_368G1_scaffold_2022_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10480..10623
DNA (144bp) protein (48aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F1_9FIRM
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EEF68109.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
SUF system FeS assembly protein, NifU family
Displaying 14 items

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