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L3_131_368G1_scaffold_411

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_411_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..470)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69529.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_411_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

751..978
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69528.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_411_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1207..2508
DNA (1302bp) protein (434aa)
Divergent AAA domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B9_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:EEF69527.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_411_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2608..3708)
DNA (1101bp) protein (367aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF69526.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
sn-glycerol-3-phosphate ABC transporter ATP-binding protein
L3_131_368G1_scaffold_411_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3708..5408)
DNA (1701bp) protein (567aa)
Alpha amylase, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B7_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEF69525.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
amyA; putative alpha amylase
L3_131_368G1_scaffold_411_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5602..6735
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69524.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_411_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7173..7436
DNA (264bp) protein (88aa)
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF69522.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Predicted transcriptional regulators
L3_131_368G1_scaffold_411_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7570..8346)
DNA (777bp) protein (259aa)
YdjC-like protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B3_9FIRM
YdjC-like protein {ECO:0000313|EMBL:EEF69521.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_411_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8362..9537)
DNA (1176bp) protein (392aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B2_9FIRM
N-acetylglucosamine-6-phosphate deacetylase
L3_131_368G1_scaffold_411_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9534..10748)
DNA (1215bp) protein (405aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Putative N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B1_9FIRM
N-acetylglucosamine-6-phosphate deacetylase
L3_131_368G1_scaffold_411_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10844..11659)
DNA (816bp) protein (272aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B0_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EEF69518.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS mannose transporter subunit IIAB
L3_131_368G1_scaffold_411_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11659..12456)
DNA (798bp) protein (266aa)
PTS system sorbose-specific iic component (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A9_9FIRM
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EEF69517.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system protein
L3_131_368G1_scaffold_411_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12472..12963)
DNA (492bp) protein (164aa)
PTS system sorbose subfamily IIB component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A8_9FIRM
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EEF69536.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
L3_131_368G1_scaffold_411_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13208..15211)
DNA (2004bp) protein (668aa)
HTH domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A7_9FIRM
HTH domain protein {ECO:0000313|EMBL:EEF69535.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_411_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15250..16641)
DNA (1392bp) protein (464aa)
MATE efflux family protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF69563.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MATE efflux family protein
L3_131_368G1_scaffold_411_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16767..17708
DNA (942bp) protein (314aa)
LysR substrate binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A5_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEF69562.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
LysR family transcriptional regulator
L3_131_368G1_scaffold_411_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17851..19821)
DNA (1971bp) protein (657aa)
F5/8 type C domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A4_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EEF69561.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
cbp32B; carbohydrate binding protein
L3_131_368G1_scaffold_411_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19988..20893
DNA (906bp) protein (302aa)
LysR substrate binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A3_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEF69560.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
HTH-type transcriptional regulator
L3_131_368G1_scaffold_411_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21798..22580)
DNA (783bp) protein (261aa)
Aldose 1-epimerase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A2_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEF69559.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aldose 1-epimerase
L3_131_368G1_scaffold_411_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22577..23044)
DNA (468bp) protein (156aa)
PTS system, fructose subfamily, IIA component (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A1_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EEF69558.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_411_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23051..25000)
DNA (1950bp) protein (650aa)
PRD domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3A0_9FIRM
PRD domain protein {ECO:0000313|EMBL:EEF69557.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Transcriptional antiterminator
L3_131_368G1_scaffold_411_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25047..25910)
DNA (864bp) protein (288aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Ketose-bisphosphate aldolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y399_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EEF69556.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_411_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25912..27003)
DNA (1092bp) protein (364aa)
Phosphotransferase system, EIIC n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y398_9FIRM
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EEF69555.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system transporter subunit IIBC
L3_131_368G1_scaffold_411_24
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27014..27328)
DNA (315bp) protein (105aa)
PTS system, Fru family, IIB component {ECO:0000313|EMBL:EEF69554.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEF69554.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system, Fru family, IIB component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y397_9FIRM
L3_131_368G1_scaffold_411_25
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27345..28400)
DNA (1056bp) protein (352aa)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Transaldolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y396_9FIRM
transaldolase
L3_131_368G1_scaffold_411_26
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28397..29509)
DNA (1113bp) protein (371aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EEF69552.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEF69552.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y395_9FIRM
alcohol dehydrogenase
L3_131_368G1_scaffold_411_27
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29502..30584)
DNA (1083bp) protein (361aa)
Putative mannose-6-phosphate isomerase, class I n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y394_9FIRM
Putative mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:EEF69550.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phosphomannose isomerase-like protein
L3_131_368G1_scaffold_411_28
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30880..32628)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y392_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69549.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ams; amylosucrase
L3_131_368G1_scaffold_411_29
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32631..33596)
DNA (966bp) protein (322aa)
Kinase, PfkB family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y391_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EEF69548.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PfkB domain-containing protein
L3_131_368G1_scaffold_411_30
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33778..35151)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y390_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69547.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Displaying items 1-30 of 43 in total

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