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L3_131_368G1_scaffold_513

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_513_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..251
DNA (249bp) protein (83aa)
Putative peptidoglycan binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y704_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEF68247.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
pdcA; peptidoglycan-binding domain 1 protein
L3_131_368G1_scaffold_513_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

361..1506
DNA (1146bp) protein (382aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEF68215.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEF68215.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Aminotransferase, class I/II n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y706_9FIRM
class I and II aminotransferase
L3_131_368G1_scaffold_513_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1605..2354)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68216.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_513_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2953..3621
DNA (669bp) protein (223aa)
Ankyrin repeat protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y710_9FIRM
Ankyrin repeat protein {ECO:0000313|EMBL:EEF68219.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
FOG: Ankyrin repeat
L3_131_368G1_scaffold_513_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3633..5705
DNA (2073bp) protein (691aa)
Putative translation elongation factor G n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y711_9FIRM
Putative translation elongation factor G {ECO:0000313|EMBL:EEF68220.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
fusA1; elongation factor G
L3_131_368G1_scaffold_513_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5886..7031)
DNA (1146bp) protein (382aa)
Trypsin n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y712_9FIRM
Trypsin {ECO:0000313|EMBL:EEF68221.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
peptidase S1/S6
L3_131_368G1_scaffold_513_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7208..8470)
DNA (1263bp) protein (421aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEF68222.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF68222.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y713_9FIRM
family 2 glycosyl transferase
L3_131_368G1_scaffold_513_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8736..9158)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y714_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68223.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_513_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9152..9922)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y715_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68224.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
membrane spanning protein
L3_131_368G1_scaffold_513_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9919..11511)
DNA (1593bp) protein (531aa)
FAD dependent oxidoreductase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y716_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEF68225.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_513_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11631..12731
DNA (1101bp) protein (367aa)
Amidohydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y717_9FIRM
Amidohydrolase {ECO:0000313|EMBL:EEF68226.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
amidohydrolase
L3_131_368G1_scaffold_513_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12921..13790
DNA (870bp) protein (290aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y718_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEF68227.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
short chain dehydrogenase
L3_131_368G1_scaffold_513_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14246..15043
DNA (798bp) protein (266aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y720_9FIRM
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEF68229.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter substrate-binding protein
L3_131_368G1_scaffold_513_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15046..15678
DNA (633bp) protein (211aa)
ABC transporter, permease protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y721_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEF68230.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein
L3_131_368G1_scaffold_513_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15690..16352
DNA (663bp) protein (221aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y722_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF68231.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter ATP-binding protein
L3_131_368G1_scaffold_513_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16337..16897)
DNA (561bp) protein (187aa)
Phosphopantetheine--protein transferase domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y723_9FIRM
Phosphopantetheine--protein transferase domain protein {ECO:0000313|EMBL:EEF68232.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
sfp; 4'-phosphopantetheinyl transferase
L3_131_368G1_scaffold_513_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16890..17117)
DNA (228bp) protein (76aa)
Putative acyl carrier protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y724_9FIRM
Putative acyl carrier protein {ECO:0000313|EMBL:EEF68233.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_513_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17126..18787)
DNA (1662bp) protein (554aa)
AMP-binding enzyme n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y725_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EEF68234.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
AMP-forming long-chain acyl-CoA synthetase
L3_131_368G1_scaffold_513_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18803..20338)
DNA (1536bp) protein (512aa)
HDIG domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y726_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EEF68235.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
response regulator receiver modulated metal dependent phosphohydrolase
L3_131_368G1_scaffold_513_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20338..22215)
DNA (1878bp) protein (626aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y727_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_131_368G1_scaffold_513_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22212..29483)
DNA (7272bp) protein (2424aa)
AMP-binding enzyme (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y728_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EEF68237.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
gramicidin synthetase
L3_131_368G1_scaffold_513_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29779..30726
DNA (948bp) protein (316aa)
adenosine deaminase (EC:3.5.4.4)
Putative adenosine deaminase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y730_9FIRM
Putative adenosine deaminase {ECO:0000313|EMBL:EEF68203.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_513_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30818..31783
DNA (966bp) protein (322aa)
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y731_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF68204.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
helix-turn-helix domain-containing protein
L3_131_368G1_scaffold_513_24
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31865..32080
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y732_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68205.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_513_25
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

32525..33400
DNA (876bp) protein (292aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Aspartate carbamoyltransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y738_9FIRM
aspartate carbamoyltransferase
L3_131_368G1_scaffold_513_26
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33401..34687
DNA (1287bp) protein (429aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Dihydroorotase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y739_9FIRM
dihydroorotase
L3_131_368G1_scaffold_513_27
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34691..35776
DNA (1086bp) protein (362aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y740_9FIRM
L3_131_368G1_scaffold_513_28
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35778..38957
DNA (3180bp) protein (1060aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium sp. CAG:217 RepID=R6J1R8_9CLOT
carbamoyl-phosphate synthase large subunit
L3_131_368G1_scaffold_513_29
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

38967..39722
DNA (756bp) protein (252aa)
dihydroorotate oxidase B, electron transfer subunit (EC:1.3.98.1)
Oxidoreductase NAD-binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y743_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EEF68175.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_513_30
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

39707..40624
DNA (918bp) protein (306aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Dihydroorotate dehydrogenase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y744_9FIRM
dihydroorotate dehydrogenase family protein
Displaying items 1-30 of 34 in total

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