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L3_131_368G1_scaffold_585

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_585_1
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

Not on your lists

comp(3..317)
DNA (315bp) protein (105aa)
Abi-like protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5Z387_9FIRM
Abi-like protein {ECO:0000313|EMBL:CDA34198.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
L3_131_368G1_scaffold_585_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

605..1162
DNA (558bp) protein (186aa)
Transcriptional regulator, TetR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6R7_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF68337.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
tetR family transcriptional regulator
L3_131_368G1_scaffold_585_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1177..1410)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68338.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_585_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1571..2488)
DNA (918bp) protein (306aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Thioredoxin reductase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S0_9FIRM
hypothetical protein
L3_131_368G1_scaffold_585_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2488..2808)
DNA (321bp) protein (107aa)
Thioredoxin n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S1_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Thioredoxin domain protein
L3_131_368G1_scaffold_585_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2972..3871
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68342.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
mechanosensitive ion channel MscS
L3_131_368G1_scaffold_585_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3939..5987
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68343.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
peptidase S9 prolyl oligopeptidase
L3_131_368G1_scaffold_585_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6100..6570)
DNA (471bp) protein (157aa)
Acetyltransferase, GNAT family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S4_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEF68315.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Acetyltransferase, GNAT family
L3_131_368G1_scaffold_585_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6561..8054)
DNA (1494bp) protein (498aa)
YjeF domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S5_9FIRM
YjeF domain protein {ECO:0000313|EMBL:EEF68316.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
carbohydrate kinase
L3_131_368G1_scaffold_585_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8143..9276
DNA (1134bp) protein (378aa)
Peptidase dimerization domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S6_9FIRM
Peptidase dimerization domain protein {ECO:0000313|EMBL:EEF68317.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
L3_131_368G1_scaffold_585_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9371..9667
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68318.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9731..10372
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68319.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_13
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10618..12594)
DNA (1977bp) protein (659aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UR95_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD04980.1}; Flags: Precursor;; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L3_131_368G1_scaffold_585_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13080..13685)
DNA (606bp) protein (202aa)
Phosphoglycerate mutase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YEH3_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEF65619.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phosphoglycerate mutase
L3_131_368G1_scaffold_585_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13907..14665
DNA (759bp) protein (253aa)
Uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YEH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65620.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14669..15547
DNA (879bp) protein (293aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEF68310.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF68310.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T0_9FIRM
family 2 glycosyl transferase
L3_131_368G1_scaffold_585_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15624..16328
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T1_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEF68311.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
two component transcriptional regulator
L3_131_368G1_scaffold_585_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16333..18582
DNA (2250bp) protein (750aa)
Histidine kinase A domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T2_9FIRM
Histidine kinase A domain protein {ECO:0000313|EMBL:EEF68312.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
two-component sensor histidine kinase
L3_131_368G1_scaffold_585_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18705..20657
DNA (1953bp) protein (651aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EEF68300.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEF68300.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system, beta-glucoside-specific, IIABC component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T7_9FIRM
bglF; PTS system beta-glucoside-specific transporter subunit IIABC
L3_131_368G1_scaffold_585_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20659..22131
DNA (1473bp) protein (491aa)
bglA; 6-phospho-beta-glucosidase (EC:3.2.1.86)
Glycosyl hydrolase, family 1 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T8_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EEF68301.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_585_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22171..23010
DNA (840bp) protein (280aa)
PRD domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6T9_9FIRM
PRD domain protein {ECO:0000313|EMBL:EEF68302.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
bglG; PTS operon transcription antiterminator
L3_131_368G1_scaffold_585_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23392..24195
DNA (804bp) protein (268aa)
Transcriptional regulator, AraC family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF68304.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24227..25189
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68305.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_24
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25182..25613
DNA (432bp) protein (144aa)
putative lactoylglutathione lyase (EC:4.4.1.5)
Glyoxalase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U3_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EEF68306.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_585_25
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25634..26092
DNA (459bp) protein (153aa)
Glyoxalase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U4_9FIRM
Glyoxalase family protein {ECO:0000313|EMBL:EEF68307.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
L3_131_368G1_scaffold_585_26
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

26239..26880
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81266.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_131_368G1_scaffold_585_27
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27051..27659)
DNA (609bp) protein (203aa)
Nitroreductase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U7_9FIRM
Nitroreductase family protein {ECO:0000313|EMBL:EEF68250.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
nitroreductase family protein
L3_131_368G1_scaffold_585_28
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27837..28178
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68251.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_585_29
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28180..28692
DNA (513bp) protein (171aa)
Heptaprenyl diphosphate synthase component I n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6U9_9FIRM
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EEF68252.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hepS; Heptaprenyl diphosphate synthase component I
L3_131_368G1_scaffold_585_30
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28775..29467
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68253.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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