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L3_131_368G1_scaffold_751

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_751_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

85..486
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69694.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_751_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

820..2154
DNA (1335bp) protein (445aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Cysteine--tRNA ligase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2W8_9FIRM
cysteinyl-tRNA synthetase
L3_131_368G1_scaffold_751_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2154..2555
DNA (402bp) protein (134aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Mini-ribonuclease 3 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2W7_9FIRM
ribonuclease III family protein
L3_131_368G1_scaffold_751_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2926..3951)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34426.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinase XerD
L3_131_368G1_scaffold_751_5
unknown

Not on your lists

4468..4581
DNA (114bp) protein (38aa)

This feature has no annotations

L3_131_368G1_scaffold_751_6
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4586..4996)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M8X4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY81582.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_131_368G1_scaffold_751_7
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5304..5513
DNA (210bp) protein (70aa)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P41 RepID=U4XFJ9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KHS57631.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hypothetical protein
L3_131_368G1_scaffold_751_8
unknown

Not on your lists

5955..6143
DNA (189bp) protein (63aa)

This feature has no annotations

L3_131_368G1_scaffold_751_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6171..6608
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34432.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
helix-turn-helix domain-containing protein
L3_131_368G1_scaffold_751_10
unknown

Not on your lists

6725..6883
DNA (159bp) protein (53aa)

This feature has no annotations

L3_131_368G1_scaffold_751_11
unknown

Not on your lists

6880..7425
DNA (546bp) protein (182aa)
UPI0003B4A501 related cluster n=1 Tax=unknown RepID=UPI0003B4A501
L3_131_368G1_scaffold_751_12
unknown

Not on your lists

7416..9455
DNA (2040bp) protein (680aa)

This feature has no annotations

L3_131_368G1_scaffold_751_13
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

9476..9679
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAF9_9FIRM
cold-shock DNA-binding domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:CEP77373.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
L3_131_368G1_scaffold_751_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9681..10067
DNA (387bp) protein (129aa)
Replication terminator protein phage-like protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LCD4_ACEWD
replication terminator protein phage-like protein
Replication terminator protein phage-like protein {ECO:0000313|EMBL:AFA50249.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L3_131_368G1_scaffold_751_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10081..10803
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAQ8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHO34527.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_131_368G1_scaffold_751_16
Carnobacterium maltaromaticum, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10808..11881
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8ERY8_CARML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO11321.2}; TaxID=1234679 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium maltaromaticum LMA28.;"
L3_131_368G1_scaffold_751_17
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11884..12633
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Veillonella atypica ACS-134-V-Col7a RepID=E1LBN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFL57993.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Col7a.;"
phage-like hydrolase
L3_131_368G1_scaffold_751_18
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12650..13639
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Erwinia tracheiphila PSU-1 RepID=R9NHR8_9ENTR
DnaD and phage-associated domain {ECO:0000313|EMBL:KHO63382.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
hypothetical protein
L3_131_368G1_scaffold_751_19
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13636..13923
DNA (288bp) protein (96aa)
UPI0003B72279 related cluster n=1 Tax=unknown RepID=UPI0003B72279
Putative uncharacterized protein {ECO:0000313|EMBL:EGD47106.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
hypothetical protein
L3_131_368G1_scaffold_751_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13916..14404
DNA (489bp) protein (163aa)
Single-stranded DNA-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3H0_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
single-stranded DNA-binding protein
L3_131_368G1_scaffold_751_21
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14420..15172
DNA (753bp) protein (251aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
dpnA; Modification methylase DpnIIB (EC:2.1.1.72)
DNA methylase n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VS51_9FIRM
L3_131_368G1_scaffold_751_22
unknown

Not on your lists

15185..15379
DNA (195bp) protein (65aa)

This feature has no annotations

L3_131_368G1_scaffold_751_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15376..15741
DNA (366bp) protein (122aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L3R2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14252.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_368G1_scaffold_751_24
unknown

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16217..16411
DNA (195bp) protein (65aa)

This feature has no annotations

L3_131_368G1_scaffold_751_25
unknown

Not on your lists

16411..16860
DNA (450bp) protein (150aa)

This feature has no annotations

L3_131_368G1_scaffold_751_26
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16942..17478
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9K5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41759.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
L3_131_368G1_scaffold_751_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17456..18724
DNA (1269bp) protein (423aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTB2_9CLOT
Phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EDO61408.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
phage terminase
L3_131_368G1_scaffold_751_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18739..20340
DNA (1602bp) protein (534aa)
Phage minor capsid protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTB1_9CLOT
Phage minor capsid protein {ECO:0000313|EMBL:EDO61407.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
portal protein
L3_131_368G1_scaffold_751_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20340..22025
DNA (1686bp) protein (562aa)
Phage minor capsid protein 2 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTB0_9CLOT
Phage minor capsid protein 2 {ECO:0000313|EMBL:EDO61406.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
phage minor capsid 2 family protein
L3_131_368G1_scaffold_751_30
unknown

Not on your lists

21979..22224
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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