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L3_131_368G1_scaffold_793

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_793_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2..388
DNA (387bp) protein (129aa)
HAD hydrolase, family IA, variant 1 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ9_9FIRM
HAD hydrolase, family IA, variant 1 {ECO:0000313|EMBL:EEF66293.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phosphatase
L3_131_368G1_scaffold_793_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(563..1372)
DNA (810bp) protein (270aa)
Linocin_M18 bacteriocin protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ8_9FIRM
Linocin_M18 bacteriocin protein {ECO:0000313|EMBL:EEF66292.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1387..1740)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66291.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2007..3011)
DNA (1005bp) protein (335aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ5_9FIRM
L3_131_368G1_scaffold_793_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3008..4345)
DNA (1338bp) protein (446aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ4_9FIRM
L3_131_368G1_scaffold_793_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4342..5559)
DNA (1218bp) protein (406aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Homoserine dehydrogenase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ3_9FIRM
homoserine dehydrogenase
L3_131_368G1_scaffold_793_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5609..7105
DNA (1497bp) protein (499aa)
Threonine synthase {ECO:0000313|EMBL:EEF66286.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EEF66286.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
thrC; putative threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ2_9FIRM
L3_131_368G1_scaffold_793_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7098..7991
DNA (894bp) protein (298aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Homoserine kinase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ1_9FIRM
homoserine kinase
L3_131_368G1_scaffold_793_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7984..8421
DNA (438bp) protein (146aa)
UPF0735 ACT domain-containing protein HOLDEFILI_03551 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCJ0_9FIRM
UPF0735 ACT domain-containing protein HOLDEFILI_03551 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8617..9201)
DNA (585bp) protein (195aa)
CAAX amino terminal protease family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCI9_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEF66283.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
CAAX protease
L3_131_368G1_scaffold_793_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9404..9973
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66282.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10078..11739)
DNA (1662bp) protein (554aa)
Diphosphate--fructose-6-phosphate 1-phosphotransferase {ECO:0000313|EMBL:EEF66458.1}; EC=2.7.1.90 {ECO:0000313|EMBL:EEF66458.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
pyrophosphate-dependent phosphofructokinase (EC:2.7.1.90)
Diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC37_9FIRM
L3_131_368G1_scaffold_793_13
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

Not on your lists

comp(12645..12992)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZG53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47418.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
hypothetical protein
L3_131_368G1_scaffold_793_14
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13721..14368)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNV6_9FIRM
Putative integral membrane protein {ECO:0000313|EMBL:ETP72192.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_131_368G1_scaffold_793_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14403..15521)
DNA (1119bp) protein (373aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57251.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L3_131_368G1_scaffold_793_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15523..17322)
DNA (1800bp) protein (600aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57252.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter
L3_131_368G1_scaffold_793_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17386..18609)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5ILI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57253.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
ABC transporter periplasmic substrate-binding protein
L3_131_368G1_scaffold_793_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18997..20103
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66456.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20115..21191
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66455.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_793_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21292..22077
DNA (786bp) protein (262aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
udp; uridine phosphorylase Udp (EC:2.4.2.3)
Uridine phosphorylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC40_9FIRM
L3_131_368G1_scaffold_793_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22230..23729)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66453.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_793_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24078..24368)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66642.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_793_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24415..24690)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66641.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_793_24
unknown

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comp(24922..25032)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_131_368G1_scaffold_793_25
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25198..26442
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66640.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_793_26
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26432..26671
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66639.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_793_27
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26729..27625)
DNA (897bp) protein (299aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
murQ; N-acetylmuramic acid 6-phosphate etherase MurQ (EC:4.2.1.126)
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK7_9FIRM
L3_131_368G1_scaffold_793_28
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27693..29546)
DNA (1854bp) protein (618aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF66637.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter ATP-binding protein
L3_131_368G1_scaffold_793_29
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29660..29809)
DNA (150bp) protein (50aa)
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBK5_9FIRM
Putative N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEF66636.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Displaying 29 items

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