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L3_131_368G1_scaffold_882

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_882_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..737
DNA (735bp) protein (245aa)
Transcriptional regulator, MerR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V8_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEF67231.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_882_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1107..2384
DNA (1278bp) protein (426aa)
Polysaccharide deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V7_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:EEF67230.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
polysaccharide deacetylase
L3_131_368G1_scaffold_882_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2469..3203
DNA (735bp) protein (245aa)
RNA methyltransferase, TrmH family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V6_9FIRM
RNA methyltransferase, TrmH family {ECO:0000313|EMBL:EEF67229.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
tRNA/rRNA methyltransferase SpoU
L3_131_368G1_scaffold_882_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3200..3934
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67228.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Esterase/lipase
L3_131_368G1_scaffold_882_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4010..6094
DNA (2085bp) protein (695aa)
PTS system, lactose/cellobiose family IIC component {ECO:0000313|EMBL:EEF67227.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEF67227.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system, lactose/cellobiose family IIC component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V4_9FIRM
hypothetical protein
L3_131_368G1_scaffold_882_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6370..8997)
DNA (2628bp) protein (876aa)
adh2; aldehyde-alcohol dehydrogenase 2 (EC:1.1.1.1 1.2.1.10)
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V3_9FIRM
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_882_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9233..11152
DNA (1920bp) protein (640aa)
Putative peptidoglycan binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V2_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEF67225.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Putative peptidoglycan-binding domain-containing protein
L3_131_368G1_scaffold_882_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11351..11623)
DNA (273bp) protein (91aa)
Acylphosphatase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V1_9FIRM
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
acylphosphatase
L3_131_368G1_scaffold_882_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12099..14711
DNA (2613bp) protein (871aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEF67223.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEF67223.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
yloB1; calcium-translocating P-type ATPase YloB (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9V0_9FIRM
L3_131_368G1_scaffold_882_10
unknown

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comp(14601..14876)
DNA (276bp) protein (92aa)

This feature has no annotations

L3_131_368G1_scaffold_882_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15178..16278
DNA (1101bp) protein (367aa)
TIGR02680 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9U5_9FIRM
TIGR02680 family protein {ECO:0000313|EMBL:EEF67255.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
conserved hypothetical protein TIGR02680
L3_131_368G1_scaffold_882_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16275..17525
DNA (1251bp) protein (417aa)
Putative TIGR02679 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9U4_9FIRM
Putative TIGR02679 family protein {ECO:0000313|EMBL:EEF67254.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_882_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

17746..18828
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9U2_9FIRM
L3_131_368G1_scaffold_882_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18822..19985
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEF67251.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEF67251.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9U1_9FIRM
phosphoglycerate dehydrogenase-like oxidoreductase
L3_131_368G1_scaffold_882_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


20412..21446
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9U0_9FIRM
L3_131_368G1_scaffold_882_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21470..23863
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9T9_9FIRM
L3_131_368G1_scaffold_882_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24086..24628
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67247.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_882_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24820..26970)
DNA (2151bp) protein (717aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
N-terminal ig-like domain of cellulase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9T6_9FIRM
glycoside hydrolase family protein
Displaying 18 items

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