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L3_131_368G1_scaffold_996

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_996_1
unknown

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3..98
DNA (96bp) protein (32aa)

This feature has no annotations

L3_131_368G1_scaffold_996_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(212..889)
DNA (678bp) protein (226aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Phosphoribosylaminoimidazolesuccinocarboxamide synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5V5_9FIRM
phosphoribosylaminoimidazole-succinocarboxamide synthase
L3_131_368G1_scaffold_996_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1040..2398)
DNA (1359bp) protein (453aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5V4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF68665.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MATE efflux family protein
L3_131_368G1_scaffold_996_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3035..4723)
DNA (1689bp) protein (563aa)
Flavocytochrome c n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9K1_9FIRM
Flavocytochrome c {ECO:0000313|EMBL:EEF67344.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
FAD-binding protein
L3_131_368G1_scaffold_996_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5109..5672)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68707.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_996_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5824..7560)
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF68706.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_996_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7553..9268)
DNA (1716bp) protein (572aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF68705.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_996_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9508..11073)
DNA (1566bp) protein (522aa)
flavocytochrome c (EC:1.3.99.1)
Flavocytochrome c n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P6_9FIRM
Flavocytochrome c {ECO:0000313|EMBL:EEF68704.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_996_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11258..11668)
DNA (411bp) protein (137aa)
Acetyltransferase, GNAT family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P5_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEF68702.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Acetyltransferase, GNAT family
L3_131_368G1_scaffold_996_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11817..12074)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68701.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_996_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12395..13093)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68700.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_996_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13340..13678)
DNA (339bp) protein (113aa)
Septum formation initiator n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5P0_9FIRM
Septum formation initiator {ECO:0000313|EMBL:EEF68698.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
divIC; septum formation initiator
L3_131_368G1_scaffold_996_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13836..14375)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68697.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_996_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14372..14677)
DNA (306bp) protein (102aa)
Sporulation protein YabP n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:EEF68696.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
spore coat protein
L3_131_368G1_scaffold_996_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14726..14989)
DNA (264bp) protein (88aa)
S4 domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N7_9FIRM
S4 domain protein {ECO:0000313|EMBL:EEF68695.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
RNA-binding S4 domain-containing protein
L3_131_368G1_scaffold_996_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15134..15553
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68694.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_996_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15798..16622
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VPV9_9FIRM
Transcription antiterminator LicT {ECO:0000313|EMBL:KGJ54327.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
bglG4; beta-glucoside operon antiterminator
L3_131_368G1_scaffold_996_18
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16678..18057
DNA (1380bp) protein (460aa)
PTS system beta-glucosides-specific transporter subunit iiABC n=1 Tax=Clostridium intestinale URNW RepID=U2PPL3_9CLOT
PTS system beta-glucosides-specific transporter subunit iiABC {ECO:0000313|EMBL:ERK28380.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
PTS system beta-glucosides-specific transporter subunit iiABC
L3_131_368G1_scaffold_996_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18057..19508
DNA (1452bp) protein (484aa)
Glycosyl hydrolase, family 1 n=4 Tax=Erysipelotrichaceae RepID=B0N4Y0_9FIRM
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EDS18732.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
glycoside hydrolase
L3_131_368G1_scaffold_996_20
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19532..20029
DNA (498bp) protein (166aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J7B2_9FIRM
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EOS30084.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
crr2; PTS system glucose-specific iia component
L3_131_368G1_scaffold_996_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20664..21188)
DNA (525bp) protein (175aa)
Putative stage V sporulation protein T n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N5_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:EEF68693.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
stage V sporulation protein T
L3_131_368G1_scaffold_996_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21241..23835)
DNA (2595bp) protein (865aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Transcription-repair-coupling factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N4_9FIRM
transcription-repair coupling factor
Displaying 22 items

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