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L3_131_368G1_scaffold_1022

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1022_1
unknown

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2..82
DNA (81bp) protein (27aa)

This feature has no annotations

L3_131_368G1_scaffold_1022_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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233..1450
DNA (1218bp) protein (406aa)
Transcriptional regulator, AraC family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDR3_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF65882.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
AraC family transcriptional regulator
L3_131_368G1_scaffold_1022_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1487..2698)
DNA (1212bp) protein (404aa)
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDR2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF65881.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1022_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2904..3218)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65880.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1022_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3357..3731
DNA (375bp) protein (125aa)
DNA-binding helix-turn-helix protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDR0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEF65879.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Helix-turn-helix.
L3_131_368G1_scaffold_1022_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4263..6902
DNA (2640bp) protein (880aa)
Putative flagellar protein FliS n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ8_9FIRM
Putative flagellar protein FliS {ECO:0000313|EMBL:EEF65877.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Signal transduction histidine kinase
L3_131_368G1_scaffold_1022_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7104..7499)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65876.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1022_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7520..8083)
DNA (564bp) protein (188aa)
Transcriptional regulator, TetR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ6_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF65875.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
TetR family transcriptional regulator
L3_131_368G1_scaffold_1022_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8258..8929
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65874.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1022_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9052..9816)
DNA (765bp) protein (255aa)
Haloacid dehalogenase-like hydrolase (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ4_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EEF65898.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
haloacid dehalogenase-like family hydrolase
L3_131_368G1_scaffold_1022_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9939..10385
DNA (447bp) protein (149aa)
Acetyltransferase, GNAT family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEF65897.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aminoalkylphosphonic acid N-acetyltransferase
L3_131_368G1_scaffold_1022_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10501..11316
DNA (816bp) protein (272aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ1_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEF65895.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative hydrolase
L3_131_368G1_scaffold_1022_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11313..11978
DNA (666bp) protein (222aa)
Response regulator receiver domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDQ0_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEF65894.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
transcriptional regulator
L3_131_368G1_scaffold_1022_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12057..12449
DNA (393bp) protein (131aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDP9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF65893.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter-like protein
L3_131_368G1_scaffold_1022_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12467..12970
DNA (504bp) protein (168aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDP9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF65893.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1022_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12963..13805
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65892.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1022_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13919..14827
DNA (909bp) protein (303aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDP7_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEF65891.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
histidine kinase
L3_131_368G1_scaffold_1022_18
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(14936..16108)
DNA (1173bp) protein (391aa)
FMN-binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDP6_9FIRM
FMN-binding domain protein {ECO:0000313|EMBL:EEF65890.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1022_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16432..17373)
DNA (942bp) protein (314aa)
scrK; 6-phosphofructokinase (ATP) (EC:2.7.1.4)
Kinase, PfkB family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDN8_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EEF65913.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1022_20
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17370..18686)
DNA (1317bp) protein (439aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDN7_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EEF65912.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1022_21
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(18683..20584)
DNA (1902bp) protein (634aa)
PTS system sucrose-specific IIBC component {ECO:0000313|EMBL:EEF65911.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEF65911.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PTS system sucrose-specific IIBC component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDN6_9FIRM
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L3_131_368G1_scaffold_1022_22
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(20790..21773)
DNA (984bp) protein (328aa)
Sugar-binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDN5_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EEF65910.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
scrR; sucrose operon repressor
L3_131_368G1_scaffold_1022_23
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22278..23366
DNA (1089bp) protein (363aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EEF65908.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EEF65908.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
formate acetyltransferase (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDN3_9FIRM
Displaying 23 items

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