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L3_131_368G1_scaffold_1105

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1105_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..1338
DNA (1338bp) protein (446aa)
Alpha amylase, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG1_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEF65982.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyl hydrolase, family 13
L3_131_368G1_scaffold_1105_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1810..2742
DNA (933bp) protein (311aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Putative ribokinase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG2_9FIRM
Putative ribokinase {ECO:0000313|EMBL:EEF65983.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1105_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3075..4784)
DNA (1710bp) protein (570aa)
Tat pathway signal sequence domain protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG3_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEF65976.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
fumarate reductase flavoprotein subunit
L3_131_368G1_scaffold_1105_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4936..5619
DNA (684bp) protein (228aa)
Transcriptional regulator, MerR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG4_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEF65977.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MerR family transcriptional regulator
L3_131_368G1_scaffold_1105_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6035..7384)
DNA (1350bp) protein (450aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF65950.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative efflux protein, MATE family
L3_131_368G1_scaffold_1105_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7659..9551)
DNA (1893bp) protein (631aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDG9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF65951.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
multidrug/protein/lipid ABC transport system ATP-binding protein
L3_131_368G1_scaffold_1105_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9538..11277)
DNA (1740bp) protein (580aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF65952.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
multidrug/protein/lipid ABC transporter ATPase
L3_131_368G1_scaffold_1105_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11301..11726)
DNA (426bp) protein (142aa)
Transcriptional regulator, MarR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH1_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF65953.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MarR family transcriptional regulator
L3_131_368G1_scaffold_1105_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11976..12797)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65955.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1105_10
unknown

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comp(12736..12939)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_131_368G1_scaffold_1105_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12965..13861)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65956.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1105_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13966..14292)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65957.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1105_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14285..15268)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF65958.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1105_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15417..15896
DNA (480bp) protein (160aa)
Putative peptidoglycan binding domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH7_9FIRM
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EEF65959.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
iron transporter FeoB
L3_131_368G1_scaffold_1105_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16028..16489
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH8_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF65960.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MarR family transcriptional regulator
L3_131_368G1_scaffold_1105_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16494..16928
DNA (435bp) protein (145aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDH9_9FIRM
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EEF65961.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
L3_131_368G1_scaffold_1105_17
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17072..18604)
DNA (1533bp) protein (511aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEF65962.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEF65962.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
cls; cardiolipin synthetase (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDI0_9FIRM
L3_131_368G1_scaffold_1105_18
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18887..19720)
DNA (834bp) protein (278aa)
PRD domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T3L7_CLOSG
Antitermination protein BlgG {ECO:0000313|EMBL:KHT32885.1}; TaxID=555 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora; subsp. carotovora).;"
antitermination protein BlgG
L3_131_368G1_scaffold_1105_19
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(19733..21115)
DNA (1383bp) protein (461aa)
Aryl-phospho-beta-D-glucosidase BglH {ECO:0000313|EMBL:KFN06961.1}; EC=3.2.1.86 {ECO:0000313|EMBL:KFN06961.1};; TaxID=44252 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus macerans (Bacillus macerans).;"
hypothetical protein n=1 Tax=Psychromonas ossibalaenae RepID=UPI0003706353
glycosyl hydrolase family protein
L3_131_368G1_scaffold_1105_20
unknown

Not on your lists

comp(21108..21287)
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 20 items

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