ggKbase home page

L3_131_368G1_scaffold_1227

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1227_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21..1910)
DNA (1890bp) protein (630aa)
Metallo-beta-lactamase domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBI1_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEF66645.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1227_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2069..2614
DNA (546bp) protein (182aa)
Transcriptional regulator, TetR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBI0_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEF66644.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
TetR family transcriptional regulator
L3_131_368G1_scaffold_1227_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2666..5644)
DNA (2979bp) protein (993aa)
Bacterial group 3 Ig-like protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH9_9FIRM
Bacterial group 3 Ig-like protein {ECO:0000313|EMBL:EEF66643.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative endo-beta-N-acetylglucosaminidase
L3_131_368G1_scaffold_1227_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5824..6525)
DNA (702bp) protein (234aa)
Methyltransferase domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH7_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EEF66698.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
yabB; O-methyltransferase
L3_131_368G1_scaffold_1227_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6507..7928)
DNA (1422bp) protein (474aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Two-component system sensor histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH6_9FIRM
L3_131_368G1_scaffold_1227_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7966..8634)
DNA (669bp) protein (223aa)
Response regulator receiver domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEF66696.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Two-component system transcriptional regulator
L3_131_368G1_scaffold_1227_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8666..11749)
DNA (3084bp) protein (1028aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00002518}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00002518};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
DNA polymerase III, alpha subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH4_9FIRM
dnaE; DNA polymerase III subunit alpha
L3_131_368G1_scaffold_1227_8
unknown

Not on your lists

comp(11862..12005)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_131_368G1_scaffold_1227_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12188..13039
DNA (852bp) protein (284aa)
EDD domain protein, DegV family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH2_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEF66693.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
DegV family protein
L3_131_368G1_scaffold_1227_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13179..13634
DNA (456bp) protein (152aa)
Transcriptional regulator, MarR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH1_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF66692.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MarR family transcriptional regulator
L3_131_368G1_scaffold_1227_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13627..14034
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66691.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1227_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14041..14337
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66690.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1227_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14602..16080
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBG7_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:EEF66688.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
spoIVA; stage IV sporulation protein A
L3_131_368G1_scaffold_1227_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16314..17657
DNA (1344bp) protein (448aa)
Trypsin n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBG5_9FIRM
Trypsin {ECO:0000313|EMBL:EEF66686.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative serine protease HtrA
L3_131_368G1_scaffold_1227_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18042..18734
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66683.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1227_16
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18783..19055
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66682.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Displaying 16 items

View Taxonomy