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L3_131_368G1_scaffold_1535

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1535_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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274..1293
DNA (1020bp) protein (340aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEF68126.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF68126.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7B8_9FIRM
glycosyl transferase, group 1 family protein
L3_131_368G1_scaffold_1535_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1450..2499
DNA (1050bp) protein (350aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7B9_9FIRM
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EEF68127.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1535_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2496..4481
DNA (1986bp) protein (662aa)
Regulatory protein RecX n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C0_9FIRM
Regulatory protein RecX {ECO:0000256|SAAS:SAAS00093789}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
bifunctional group 1 glycosyl transferase/recombination regulator RecX
L3_131_368G1_scaffold_1535_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4474..5442
DNA (969bp) protein (323aa)
HD domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C1_9FIRM
HD domain protein {ECO:0000313|EMBL:EEF68129.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
3'-5' exoribonuclease YhaM
L3_131_368G1_scaffold_1535_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5758..6498
DNA (741bp) protein (247aa)
PHP domain protein {ECO:0000313|EMBL:EEF68131.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEF68131.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PHP domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C3_9FIRM
CpsB protein
L3_131_368G1_scaffold_1535_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6589..6969
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68132.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1535_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7202..8557
DNA (1356bp) protein (452aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C5_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EEF68133.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein
L3_131_368G1_scaffold_1535_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8674..10062
DNA (1389bp) protein (463aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF68134.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MATE efflux family protein
L3_131_368G1_scaffold_1535_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10490..11653
DNA (1164bp) protein (388aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C7_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEF68135.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
transcriptional regulator
L3_131_368G1_scaffold_1535_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11704..12411
DNA (708bp) protein (236aa)
Chain length determinant protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7C8_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EEF68136.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
lipopolysaccharide biosynthesis protein
L3_131_368G1_scaffold_1535_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12411..13166
DNA (756bp) protein (252aa)
Capsular exopolysaccharide family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y884_9FIRM
Capsular exopolysaccharide family {ECO:0000313|EMBL:EEF67840.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
capsular polysaccharide biosynthesis protein Cap1B
L3_131_368G1_scaffold_1535_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13163..13909
DNA (747bp) protein (249aa)
PHP domain protein {ECO:0000313|EMBL:EEF66564.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEF66564.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
protein-tyrosine-phosphatase (EC:3.1.3.48)
PHP domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBN6_9FIRM
L3_131_368G1_scaffold_1535_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13949..14923
DNA (975bp) protein (325aa)
Polysaccharide biosynthesis protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7D1_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEF68089.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Predicted nucleoside-diphosphate sugar epimerases
Displaying 13 items

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