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L3_131_368G1_scaffold_1540

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1540_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..1673)
DNA (1671bp) protein (557aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Lon protease n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y854_9FIRM
ATP-dependent protease La
L3_131_368G1_scaffold_1540_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1734..3008)
DNA (1275bp) protein (425aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Trigger factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y853_9FIRM
tig; trigger factor
L3_131_368G1_scaffold_1540_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3067..3798)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y852_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67808.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1540_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4411..4884)
DNA (474bp) protein (158aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Phosphodiesterase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y849_9FIRM
phosphoesterase, MJ0936 family
L3_131_368G1_scaffold_1540_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4925..5911)
DNA (987bp) protein (329aa)
Putative phage tail component domain protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y847_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:EEF67846.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
gerM; spore germination protein gerM
L3_131_368G1_scaffold_1540_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6110..6844)
DNA (735bp) protein (245aa)
glutamate racemase (EC:5.1.1.3)
Putative glutamate racemase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y846_9FIRM
Putative glutamate racemase {ECO:0000313|EMBL:EEF67854.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1540_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6841..7854)
DNA (1014bp) protein (338aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y845_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEF67853.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
D-alanyl-D-alanine carboxypeptidase
L3_131_368G1_scaffold_1540_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7914..8117)
DNA (204bp) protein (68aa)
Spore germination protein GerE n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y844_9FIRM
Spore germination protein GerE {ECO:0000313|EMBL:EEF67852.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
gerE; spore coat protein transcriptional regulator
L3_131_368G1_scaffold_1540_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8166..9929)
DNA (1764bp) protein (588aa)
UvrABC system protein C n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y843_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Excinuclease ABC subunit C
L3_131_368G1_scaffold_1540_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9926..12259)
DNA (2334bp) protein (778aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Endonuclease MutS2 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y842_9FIRM
mutS2; DNA mismatch repair protein MutS2
L3_131_368G1_scaffold_1540_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12262..12939)
DNA (678bp) protein (226aa)
CvpA family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y841_9FIRM
CvpA family protein {ECO:0000313|EMBL:EEF67849.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
colicin V production protein
L3_131_368G1_scaffold_1540_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13028..13930
DNA (903bp) protein (301aa)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Ribonuclease HIII n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y840_9FIRM
ribonuclease HIII
L3_131_368G1_scaffold_1540_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14148..14444)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66378.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1540_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14533..14871)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66378.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
conserved protein of unknown function
Displaying 14 items

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