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L3_131_368G1_scaffold_1675

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1675_1
unknown

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208..924
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Succinimonas amylolytica RepID=UPI00035F3F59
L3_131_368G1_scaffold_1675_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1151..1984)
DNA (834bp) protein (278aa)
Cof-like hydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6G5_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEF68388.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative hydrolase
L3_131_368G1_scaffold_1675_3
unknown

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comp(2153..2350)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_131_368G1_scaffold_1675_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2386..3486
DNA (1101bp) protein (367aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6G7_9FIRM
L3_131_368G1_scaffold_1675_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3756..5774
DNA (2019bp) protein (673aa)
UPF0313 protein HOLDEFILI_01400 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6G8_9FIRM
UPF0313 protein HOLDEFILI_01400 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Fe-S oxidoreductase
L3_131_368G1_scaffold_1675_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6225..7361
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H0_9FIRM
L3_131_368G1_scaffold_1675_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7596..8732
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
nagA_1; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H2_9FIRM
L3_131_368G1_scaffold_1675_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8725..9531
DNA (807bp) protein (269aa)
Cof-like hydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H3_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEF68396.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Hydrolase (HAD superfamily)
L3_131_368G1_scaffold_1675_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9518..10360
DNA (843bp) protein (281aa)
Aldose 1-epimerase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H4_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEF68397.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
aldose 1-epimerase family protein
L3_131_368G1_scaffold_1675_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10447..11175
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H5_9FIRM
L3_131_368G1_scaffold_1675_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11347..11658
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H6_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
thioredoxin
L3_131_368G1_scaffold_1675_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11714..11923
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68400.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1675_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12187..12726
DNA (540bp) protein (180aa)
Cupin domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H8_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EEF68401.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
XRE family transcriptional regulator
L3_131_368G1_scaffold_1675_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12752..13561
DNA (810bp) protein (270aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6H9_9FIRM
potA; spermidine/putrescine ABC transporter ATP-binding protein
Displaying 14 items

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