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L3_131_368G1_scaffold_1806

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1806_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1..474
DNA (474bp) protein (158aa)
O-methyltransferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y963_9FIRM
O-methyltransferase {ECO:0000313|EMBL:EEF67494.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
O-methyltransferase family protein
L3_131_368G1_scaffold_1806_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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526..1071
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y962_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67493.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1806_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1305..2132
DNA (828bp) protein (276aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y960_9FIRM
cbiO.2; cobalt ABC transporter ATP-binding subunit
L3_131_368G1_scaffold_1806_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2108..2965
DNA (858bp) protein (286aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y959_9FIRM
ABC-type cobalt transport system, ATPase component
L3_131_368G1_scaffold_1806_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2962..3759
DNA (798bp) protein (266aa)
Cobalt transport protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y958_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:EEF67489.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC-type cobalt transport system, permease component CbiQ and related transporters
L3_131_368G1_scaffold_1806_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3756..4562
DNA (807bp) protein (269aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
tRNA pseudouridine synthase A n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y957_9FIRM
truA; tRNA pseudouridine synthase A
L3_131_368G1_scaffold_1806_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4663..5040)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y956_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67487.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1806_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5142..5462
DNA (321bp) protein (107aa)
Transcriptional regulator, PadR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y955_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EEF67486.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
PadR family transcriptional regulator
L3_131_368G1_scaffold_1806_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5455..6045
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y954_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67485.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1806_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6042..6902
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y953_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67484.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1806_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7136..7573
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y952_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
rplM; 50S ribosomal protein L13
L3_131_368G1_scaffold_1806_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7589..7996
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y951_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
SSU ribosomal protein S9P
L3_131_368G1_scaffold_1806_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8432..9253
DNA (822bp) protein (274aa)
Chromosome partitioning protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CYE5_9CLOT
Chromosome partitioning protein {ECO:0000313|EMBL:ENZ61777.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
chromosome partitioning protein ParA
L3_131_368G1_scaffold_1806_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9210..10145
DNA (936bp) protein (312aa)
ParB-like partition protein n=1 Tax=Clostridium bolteae 90A9 RepID=R0A743_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:ENZ47891.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
parB-like partition protein
L3_131_368G1_scaffold_1806_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10158..10433
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61779.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_131_368G1_scaffold_1806_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10456..10647
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0BBN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61780.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_131_368G1_scaffold_1806_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10714..11592
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0BBA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61781.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_131_368G1_scaffold_1806_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11640..12002
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CYE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61782.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_131_368G1_scaffold_1806_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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11995..12306
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=F4XFN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46257.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L3_131_368G1_scaffold_1806_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12319..12414
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YJB6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24869.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying 20 items

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