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L3_131_368G1_scaffold_1824

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1824_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y906_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67551.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1824_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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165..761
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y905_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67550.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1824_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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764..1195
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y904_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67549.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
L3_131_368G1_scaffold_1824_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1195..1401
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y903_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67548.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1824_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1470..2240)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y902_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67547.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1824_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2466..3287
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y901_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEF67546.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
HAD-superfamily hydrolase, subfamily IIB
L3_131_368G1_scaffold_1824_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3359..3988)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y900_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67545.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1824_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4284..4889
DNA (606bp) protein (202aa)
Uracil-DNA glycosylase, family 4 {ECO:0000313|EMBL:EEF67543.1}; EC=3.2.2.- {ECO:0000313|EMBL:EEF67543.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Uracil-DNA glycosylase, family 4 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z8_9FIRM
uracil-DNA glycosylase superfamily protein
L3_131_368G1_scaffold_1824_9
unknown

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4892..5395
DNA (504bp) protein (168aa)

This feature has no annotations

L3_131_368G1_scaffold_1824_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5457..6104
DNA (648bp) protein (216aa)
Peptidase family S51 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z6_9FIRM
Peptidase family S51 {ECO:0000313|EMBL:EEF67541.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1824_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6327..6980
DNA (654bp) protein (218aa)
HD domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z5_9FIRM
HD domain protein {ECO:0000313|EMBL:EEF67540.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
metal dependent phosphohydrolase
L3_131_368G1_scaffold_1824_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7196..8335)
DNA (1140bp) protein (380aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z3_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEF67538.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1824_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8445..9725)
DNA (1281bp) protein (427aa)
RNA polymerase sigma-54 factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z2_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEF67537.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
RNA polymerase sigma 54 subunit RpoN
L3_131_368G1_scaffold_1824_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9891..12215
DNA (2325bp) protein (775aa)
Sigma-54 interaction domain protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8Z0_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEF67582.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
AtoC; ATPase
Displaying 14 items

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