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L3_131_368G1_scaffold_1870

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1870_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..215)
DNA (213bp) protein (71aa)
Uncharacterized protein (Fragment) n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y949_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67480.1}; Flags: Fragment;; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1870_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(379..1104)
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC99_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
sporulation sigma factor SigF
L3_131_368G1_scaffold_1870_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1097..1525)
DNA (429bp) protein (143aa)
Anti-sigma F factor {ECO:0000313|EMBL:EEF66420.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EEF66420.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Anti-sigma F factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC98_9FIRM
anti-sigma F factor
L3_131_368G1_scaffold_1870_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1522..1851)
DNA (330bp) protein (110aa)
Anti-sigma factor antagonist n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC97_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
spoIIAA; stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain)
L3_131_368G1_scaffold_1870_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2068..3219)
DNA (1152bp) protein (384aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC96_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEF66418.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1870_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3294..4349)
DNA (1056bp) protein (352aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEF66417.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEF66417.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC95_9FIRM
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase
L3_131_368G1_scaffold_1870_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4443..5285)
DNA (843bp) protein (281aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEF66417.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEF66417.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC95_9FIRM
peptidase S9 prolyl oligopeptidase
L3_131_368G1_scaffold_1870_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5278..7266)
DNA (1989bp) protein (663aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEF66416.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEF66416.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC94_9FIRM
peptidase S9 prolyl oligopeptidase
L3_131_368G1_scaffold_1870_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7271..9268)
DNA (1998bp) protein (666aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEF66414.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEF66414.1};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC93_9FIRM
peptidase S9 prolyl oligopeptidase active site domain-containing protein
L3_131_368G1_scaffold_1870_10
unknown

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9497..10012
DNA (516bp) protein (172aa)

This feature has no annotations

L3_131_368G1_scaffold_1870_11
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10232..10834)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2N899_CORGP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB07282.1}; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
L3_131_368G1_scaffold_1870_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10827..11630)
DNA (804bp) protein (268aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB03_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF66811.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
putative efflux protein, MATE family
Displaying 12 items

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