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L3_131_368G1_scaffold_1884

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1884_1
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..115
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45146.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L3_131_368G1_scaffold_1884_2
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

118..1191
DNA (1074bp) protein (358aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Arabinogalactan endo-1 4-beta-galactosidase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R639_9FIRM
arabinogalactan endo-1,4-beta-galactosidase
L3_131_368G1_scaffold_1884_3
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1206..2405
DNA (1200bp) protein (400aa)
Extracellular solute-binding protein family 1 n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3A9_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDF45144.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
family 1 extracellular solute-binding protein
L3_131_368G1_scaffold_1884_4
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2413..3324
DNA (912bp) protein (304aa)
Sugar ABC transporter inner membrane protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R518_9FIRM
Sugar ABC transporter inner membrane protein {ECO:0000313|EMBL:CDF45143.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
sugar ABC transporter inner membrane protein
L3_131_368G1_scaffold_1884_5
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3325..4170
DNA (846bp) protein (282aa)
ABC transporter transmembrane protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R2K3_9FIRM
ABC transporter transmembrane protein {ECO:0000313|EMBL:CDF45142.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
ABC transporter transmembrane protein
L3_131_368G1_scaffold_1884_6
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4261..6264
DNA (2004bp) protein (668aa)
Glycoside hydrolase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5L6_9FIRM
Glycoside hydrolase {ECO:0000313|EMBL:CDF45141.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
alpha-glucosidase, family 31 of glycosyl hydrolase
L3_131_368G1_scaffold_1884_7
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6451..7245
DNA (795bp) protein (265aa)
O-methyltransferase domain protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R634_9FIRM
O-methyltransferase domain protein {ECO:0000313|EMBL:CDF45140.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
O-Methyltransferase involved in polyketide biosynthesis
L3_131_368G1_scaffold_1884_8
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7249..8139)
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3A1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDF45139.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Transcriptional regulator
L3_131_368G1_scaffold_1884_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8284..9555
DNA (1272bp) protein (424aa)
Di-and tricarboxylate transporters n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1B6_9FIRM
Di-and tricarboxylate transporters
Di-and tricarboxylate transporters {ECO:0000313|EMBL:CBL13406.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_131_368G1_scaffold_1884_10
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9602..10513
DNA (912bp) protein (304aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R2J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45137.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L3_131_368G1_scaffold_1884_11
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10535..11164
DNA (630bp) protein (210aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region (EC:4.2.1.32)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45136.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L3_131_368G1_scaffold_1884_12
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11176..11697
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KS28_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF46694.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L3_131_368G1_scaffold_1884_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11694..12647
DNA (954bp) protein (318aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7GHI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98717.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_131_368G1_scaffold_1884_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12745..13161)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYV0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA56185.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_131_368G1_scaffold_1884_15
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13259..13519
DNA (261bp) protein (87aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274)
2 5-didehydrogluconate reductase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R9P2_9FIRM
2 5-didehydrogluconate reductase {ECO:0000313|EMBL:CDF46778.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L3_131_368G1_scaffold_1884_16
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13870..14871
DNA (1002bp) protein (334aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H8M6_9FIRM
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:CDE35313.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L3_131_368G1_scaffold_1884_17
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15304..16341
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R476_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44530.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Predicted membrane protein
L3_131_368G1_scaffold_1884_18
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16468..17457
DNA (990bp) protein (330aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
Biotin synthase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R1J0_9FIRM
biotin synthase
L3_131_368G1_scaffold_1884_19
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17507..17788
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R336_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44528.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L3_131_368G1_scaffold_1884_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17772..18905
DNA (1134bp) protein (378aa)
HipA N-terminal domain n=1 Tax=Eubacterium rectale M104/1 RepID=D4JGW5_9FIRM
HipA N-terminal domain
HipA N-terminal domain {ECO:0000313|EMBL:CBK92599.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_131_368G1_scaffold_1884_21
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18954..19211
DNA (258bp) protein (86aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JMP4_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
sugar fermentation stimulation protein
Displaying 21 items

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