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L3_132_000G1_scaffold_8

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Displaying items 1-30 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000G1_scaffold_8_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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593..1285
DNA (693bp) protein (231aa)
Transcriptional regulatory family protein n=207 Tax=Clostridium difficile RepID=C9XL82_CLODC
two-component system response regulator
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQE62445.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1481..3541
DNA (2061bp) protein (687aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
His Kinase A domain protein n=75 Tax=Clostridium difficile RepID=T2UHE5_CLODI
Two-component sensor histidine kinase
L3_132_000G1_scaffold_8_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3747..4070)
DNA (324bp) protein (108aa)
Branched-chain amino acid transport protein n=191 Tax=Clostridium difficile RepID=G6BZ23_CLODI
hypothetical protein
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:EQE62425.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4063..4764)
DNA (702bp) protein (234aa)
AzlC family protein n=187 Tax=Clostridium difficile RepID=C9XL79_CLODC
hypothetical protein
AzlC family protein {ECO:0000313|EMBL:EQE62426.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5042..6427)
DNA (1386bp) protein (462aa)
Transcriptional regulator, GntR family n=17 Tax=Clostridium difficile RepID=G6BZ21_CLODI
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCL30508.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_132_000G1_scaffold_8_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6535..7773)
DNA (1239bp) protein (413aa)
Peptidase, M56 family n=17 Tax=Clostridium difficile RepID=G6BZ20_CLODI
Putative beta-lactamase inducer {ECO:0000313|EMBL:CCL22603.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
beta-lactamase inducer
L3_132_000G1_scaffold_8_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7786..8121)
DNA (336bp) protein (112aa)
Penicillinase repressor family protein n=24 Tax=Clostridium difficile RepID=T2URV2_CLODI
beta-lactamase repressor
Penicillinase repressor family protein {ECO:0000313|EMBL:EQE62431.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8682..9104)
DNA (423bp) protein (141aa)
Uncharacterized protein n=188 Tax=Clostridium difficile RepID=C9XL76_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30505.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_132_000G1_scaffold_8_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9199..9351)
DNA (153bp) protein (51aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=T3FIP8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDS87684.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_132_000G1_scaffold_8_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9582..12485
DNA (2904bp) protein (968aa)
AAA domain family protein n=36 Tax=Clostridium difficile RepID=T3GIH5_CLODC
Transcription antiterminator, PTS operonregulator
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ69167.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_132_000G1_scaffold_8_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12518..12964
DNA (447bp) protein (149aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=38 Tax=Clostridium difficile RepID=G6BZ16_CLODI
PTS system transporter subunit IIBC
PTS system, IIbc component {ECO:0000313|EMBL:CBE05299.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_132_000G1_scaffold_8_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13087..13389
DNA (303bp) protein (101aa)
PTS system, IIb component n=177 Tax=Clostridium difficile RepID=C9XL73_CLODC
PTS system transporter subunit IIB
PTS system, fructose/mannitol family IIB component {ECO:0000313|EMBL:CCK94735.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
L3_132_000G1_scaffold_8_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13570..14976
DNA (1407bp) protein (469aa)
PTS system sugar-specific permease component family protein n=29 Tax=Clostridium difficile RepID=T2URU8_CLODI
PTS system fructose/mannitol family transporter subunit IIC
PTS system, fructose/mannitol family IIC component {ECO:0000313|EMBL:CCL22597.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_132_000G1_scaffold_8_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15320..16378
DNA (1059bp) protein (353aa)
sugar-phosphate dehydrogenase (EC:1.1.1.-)
Zinc-binding dehydrogenase family protein n=14 Tax=Clostridium difficile RepID=T2UST7_CLODI
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EQH99084.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_132_000G1_scaffold_8_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16477..17163
DNA (687bp) protein (229aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EQG76574.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EQG76574.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L-ribulose-5-phosphate 4-epimerase n=172 Tax=Clostridium difficile RepID=T3GII6_CLODC
L3_132_000G1_scaffold_8_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17181..17828
DNA (648bp) protein (216aa)
Class II aldolase (EC:4.1.2.17)
Class II Aldolase and Adducin N-terminal domain protein n=54 Tax=Clostridium difficile RepID=T2US60_CLODI
Class II Aldolase and Adducin N-terminal domain protein {ECO:0000313|EMBL:EQH99082.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_132_000G1_scaffold_8_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18001..19368)
DNA (1368bp) protein (456aa)
Amino acid carrier family protein n=167 Tax=Clostridium difficile RepID=T3GK66_CLODC
Sodium:alanine symporter
Sodium:alanine symporter {ECO:0000313|EMBL:CDS85718.1}; Sodium:solute symporter {ECO:0000313|EMBL:CKH27086.1}; Uncharacterized transporter HI_0883 {ECO:0000313|EMBL:CDS87667.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_132_000G1_scaffold_8_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20074..22194
DNA (2121bp) protein (707aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
topB2; DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=28 Tax=Clostridium difficile RepID=T2URU4_CLODI
L3_132_000G1_scaffold_8_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22298..23551
DNA (1254bp) protein (418aa)
Uncharacterized protein n=30 Tax=Clostridium difficile RepID=T2UST4_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ69158.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_132_000G1_scaffold_8_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23705..24766)
DNA (1062bp) protein (354aa)
Sporulation integral membrane protein YtvI n=186 Tax=Clostridium difficile RepID=G6BZ06_CLODI
sporulation integral membrane protein
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EQE62449.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..25780
DNA (741bp) protein (247aa)
Tyrosine phosphatase family protein n=157 Tax=Clostridium difficile RepID=C9XL64_CLODC
hypothetical protein
Tyrosine phosphatase family protein {ECO:0000313|EMBL:EQE62427.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_132_000G1_scaffold_8_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25792..27570
DNA (1779bp) protein (593aa)
HTH domain protein n=125 Tax=Clostridium difficile RepID=G6BZ04_CLODI
transcription antiterminator
Transcription antiterminator, PTS operon regulator {ECO:0000313|EMBL:CAJ69155.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_132_000G1_scaffold_8_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27737..28654
DNA (918bp) protein (306aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Tagatose-6-phosphate kinase n=77 Tax=Clostridium difficile RepID=T2TD89_CLODI
1-phosphofructokinase
L3_132_000G1_scaffold_8_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28691..30610
DNA (1920bp) protein (640aa)
PTS system, IIbc component n=85 Tax=Clostridium difficile RepID=C9XL61_CLODC
PTS system transporter subunit IIBC
PTS system, IIbc component {ECO:0000313|EMBL:CBE05276.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_132_000G1_scaffold_8_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31150..32112
DNA (963bp) protein (321aa)
CAAX protease self-immunity family protein n=74 Tax=Clostridium difficile RepID=T2TXU4_CLODI
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EQE62488.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
membrane-associated caaX amino terminal protease
L3_132_000G1_scaffold_8_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32492..34018
DNA (1527bp) protein (509aa)
FAD binding domain protein n=28 Tax=Clostridium difficile RepID=T2UUH8_CLODI
Putative oxidoreductase, FAD dependent {ECO:0000313|EMBL:CCL22584.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative oxidoreductase, FAD dependent
L3_132_000G1_scaffold_8_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34046..34603
DNA (558bp) protein (186aa)
Uncharacterized protein n=158 Tax=Clostridium difficile RepID=G6BZ00_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CEJ98875.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_132_000G1_scaffold_8_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35125..36168
DNA (1044bp) protein (348aa)
Uncharacterized protein n=49 Tax=Clostridium difficile RepID=T2V4G0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQH99071.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L3_132_000G1_scaffold_8_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36279..37421
DNA (1143bp) protein (381aa)
prsA; Peptidyl-prolyl cis-trans isomerase, PpiC-type (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
PPIC-type PPIASE domain protein n=9 Tax=Clostridium difficile RepID=T3EL26_CLODI
L3_132_000G1_scaffold_8_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37875..39266
DNA (1392bp) protein (464aa)
H+ symporter family protein n=207 Tax=Clostridium difficile RepID=C9XL55_CLODC
proton-dependent oligopeptide transporter
H+ symporter family protein {ECO:0000313|EMBL:EQI81689.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
Displaying items 1-30 of 213 in total

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