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L3_132_000G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000G1_scaffold_17_1
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..306)
DNA (306bp) protein (102aa)
Pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Pyruvate kinase n=15 Tax=Bifidobacterium RepID=D3R5H5_BIFAB
L3_132_000G1_scaffold_17_2
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(468..1421)
DNA (954bp) protein (318aa)
tellurium resistance protein TerC n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B77200
tellurium resistance protein TerC
Tellurium resistance protein TerC {ECO:0000313|EMBL:AIZ16416.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_3
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1503..3614)
DNA (2112bp) protein (704aa)
excinuclease ABC subunit B n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B67CA0
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
excinuclease ABC subunit B
L3_132_000G1_scaffold_17_4
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3623..4264)
DNA (642bp) protein (214aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
dephospho-CoA kinase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B6EAB2
dephospho-CoA kinase
L3_132_000G1_scaffold_17_5
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4372..5853)
DNA (1482bp) protein (494aa)
30S ribosomal protein S1 {ECO:0000313|EMBL:KFI79860.1}; EC=1.17.1.2 {ECO:0000313|EMBL:KFI79860.1};; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
30S ribosomal protein S1 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B333A5
30S ribosomal protein S1
L3_132_000G1_scaffold_17_6
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5996..6880)
DNA (885bp) protein (295aa)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7826F
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
methenyltetrahydrofolate cyclohydrolase
L3_132_000G1_scaffold_17_7
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7005..8033
DNA (1029bp) protein (343aa)
ABC transporter substrate-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B761A6
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AIZ16421.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_8
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8074..8955
DNA (882bp) protein (294aa)
ABC transporter ATP-binding protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B69799
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIZ16422.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_9
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8978..9814
DNA (837bp) protein (279aa)
zinc ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B639F1
Mn2+/Zn2+ ABC transporter permease {ECO:0000313|EMBL:KFI77436.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
zinc ABC transporter permease
L3_132_000G1_scaffold_17_10
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9830..10315)
DNA (486bp) protein (162aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7797D
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_132_000G1_scaffold_17_11
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10312..10908)
DNA (597bp) protein (199aa)
CarD family transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3614B
CarD family transcriptional regulator
CarD family transcriptional regulator {ECO:0000313|EMBL:AIZ16425.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_12
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11045..13297
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=31954 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. pseudolongum.;"
1,4-alpha-glucan branching protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5D119
1,4-alpha-glucan branching protein
L3_132_000G1_scaffold_17_13
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13316..14029
DNA (714bp) protein (238aa)
Chemotaxis protein CheY {ECO:0000313|EMBL:KFI77440.1}; EC=4.6.1.1 {ECO:0000313|EMBL:KFI77440.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
chemotaxis protein CheY n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B2FA23
chemotaxis protein CheY
L3_132_000G1_scaffold_17_14
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14029..15108
DNA (1080bp) protein (360aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
membrane protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B5470B
membrane protein
L3_132_000G1_scaffold_17_15
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15103..15828)
DNA (726bp) protein (242aa)
phosphoribosyl transferase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B467F7
Phosphoribosyl transferase {ECO:0000313|EMBL:KFI77442.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
phosphoribosyl transferase
L3_132_000G1_scaffold_17_16
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15825..16649)
DNA (825bp) protein (275aa)
HAD family hydrolase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B35D1E
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AIZ16430.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_17
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16800..17162
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B72C2D
Uncharacterized protein {ECO:0000313|EMBL:KFI77444.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
peptidase
L3_132_000G1_scaffold_17_18
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17172..18716)
DNA (1545bp) protein (515aa)
organic solvents resistance ABC transporter permease n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3E9D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ16432.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_19
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18713..21811)
DNA (3099bp) protein (1033aa)
glycosyl transferase family 2 n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3C2B0
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ16433.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_20
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21997..23460
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B731E2
Transcriptional regulator {ECO:0000313|EMBL:KFI77447.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
transcriptional regulator
L3_132_000G1_scaffold_17_21
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23862..24797
DNA (936bp) protein (312aa)
Transcriptional regulator n=7 Tax=Bifidobacterium animalis subsp. lactis RepID=C6A8B5_BIFLB
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIZ16435.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_22
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24940..26580
DNA (1641bp) protein (547aa)
signal peptide protein n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B49326
DNA segregation ATPase {ECO:0000313|EMBL:KFI77449.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
cell division protein FtsK
L3_132_000G1_scaffold_17_23
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26695..26973
DNA (279bp) protein (93aa)
transcriptional regulator n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B67E7C
WhiB family transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_24
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27058..28548)
DNA (1491bp) protein (497aa)
Sensory histidine kinase {ECO:0000313|EMBL:KFI77451.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KFI77451.1};; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
sensory histidine kinase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B3CBE8
histidine kinase
L3_132_000G1_scaffold_17_25
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28637..29533
DNA (897bp) protein (299aa)
hemolysin III n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B30EF1
hemolysin III
Hemolysin III {ECO:0000313|EMBL:AIZ16439.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_26
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29616..30098)
DNA (483bp) protein (161aa)
transcription elongation factor GreA n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B58577
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_27
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30231..30638)
DNA (408bp) protein (136aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
peptidylprolyl isomerase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B7468F
peptidylprolyl isomerase
L3_132_000G1_scaffold_17_28
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30712..32187)
DNA (1476bp) protein (492aa)
serine dehydratase n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B40C7C
serine ammonia-lyase
Serine ammonia-lyase {ECO:0000313|EMBL:AIZ16442.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
L3_132_000G1_scaffold_17_29
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32232..32819)
DNA (588bp) protein (196aa)
cadmium transporter n=1 Tax=Bifidobacterium pseudolongum RepID=UPI0003B76FF5
Cd efflux system component {ECO:0000313|EMBL:KFI77456.1}; TaxID=1690 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum subsp. globosum.;"
cadmium transporter
L3_132_000G1_scaffold_17_30
Bifidobacterium pseudolongum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33038..34072)
DNA (1035bp) protein (345aa)
Possible exopolyphosphatase-like protein n=13 Tax=Bifidobacterium animalis subsp. lactis RepID=B8DTJ2_BIFA0
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AIZ16444.1}; TaxID=1447715 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudolongum PV8-2.;"
Displaying items 1-30 of 164 in total

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