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L3_132_000G1_scaffold_27

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Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000G1_scaffold_27_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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655..912
DNA (258bp) protein (86aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWE3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99480.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter ATP-binding protein
L3_132_000G1_scaffold_27_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1023..2765)
DNA (1743bp) protein (581aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MY44_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC04653.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
multidrug ABC transporter ATPase and permease
L3_132_000G1_scaffold_27_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2766..4568)
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AV89_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI63313.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
multidrug ABC transporter ATPase and permease
L3_132_000G1_scaffold_27_4
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4738..5355)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUE3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EOQ38747.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
transcriptional regulator, TetR family
L3_132_000G1_scaffold_27_5

Not on your lists

comp(5641..6531)
DNA (891bp) protein (297aa)
NAD-dependent protein deacetylase n=1 Tax=uncultured bacterium scaffold00090 RepID=I7AVD8_9BACT
NAD-dependent protein deacetylase {ECO:0000313|EMBL:AFN84540.1}; TaxID=1132476 species="Bacteria; environmental samples.;" source="uncultured bacterium scaffold00090.;"
hypothetical protein
L3_132_000G1_scaffold_27_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6476..7255)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z733_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59874.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_132_000G1_scaffold_27_7
unknown

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comp(7252..7479)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_132_000G1_scaffold_27_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7486..8025)
DNA (540bp) protein (180aa)
Flavin reductase like domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NJ44_CLODI
Flavin reductase like domain protein {ECO:0000313|EMBL:EQJ55324.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_132_000G1_scaffold_27_9
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8025..8624)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HUQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO16628.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
nitroreductase
L3_132_000G1_scaffold_27_10
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8626..9660)
DNA (1035bp) protein (345aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=1 Tax=Stomatobaculum longum RepID=H1HUQ4_9FIRM
Radical SAM additional 4Fe4S-binding domain-containing protein {ECO:0000313|EMBL:EHO16625.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
Predicted Fe-S oxidoreductases
L3_132_000G1_scaffold_27_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9750..9923)
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63954.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_132_000G1_scaffold_27_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10148..10471
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZ69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63953.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
HxlR family transcriptional regulator
L3_132_000G1_scaffold_27_13
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10905..11978
DNA (1074bp) protein (358aa)
Putative iron compound ABC transporter periplasmic iron compound-binding protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C7A9_9CLOT
Putative iron compound ABC transporter periplasmic iron compound-binding protein {ECO:0000313|EMBL:CDA61287.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative iron compound ABC transporter periplasmic iron compound-binding protein
L3_132_000G1_scaffold_27_14
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11975..13039
DNA (1065bp) protein (355aa)
Iron chelate uptake ABC transporter FeCT family permease protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BAS0_9CLOT
Iron chelate uptake ABC transporter FeCT family permease protein {ECO:0000313|EMBL:CDA61288.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_132_000G1_scaffold_27_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13036..13842
DNA (807bp) protein (269aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=U2BB49_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO34366.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_132_000G1_scaffold_27_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13902..14240
DNA (339bp) protein (113aa)
CGGC domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSC4_9FIRM
CGGC domain protein {ECO:0000313|EMBL:EDN01162.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
CGGC domain.
L3_132_000G1_scaffold_27_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14299..15075
DNA (777bp) protein (259aa)
cbiK; sirohydrochlorin cobaltochelatase CbiK (EC:4.99.1.3)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73884.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_132_000G1_scaffold_27_18
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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15065..16201
DNA (1137bp) protein (379aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQD7_9FIRM
cobalamin biosynthesis protein CbiD
L3_132_000G1_scaffold_27_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16198..16881
DNA (684bp) protein (228aa)
precorrin-2 C20-methyltransferase (EC:2.1.1.130)
Precorrin-2 C(20)-methyltransferase n=2 Tax=Oscillibacter RepID=U2QXH6_9FIRM
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:ERK63247.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_132_000G1_scaffold_27_20
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16887..17648
DNA (762bp) protein (254aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQD9_9FIRM
Cobalt-precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:KJF39857.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
L3_132_000G1_scaffold_27_21
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17638..18633
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MFZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66752.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Cobalamin biosynthesis protein CbiG
L3_132_000G1_scaffold_27_22
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18626..19363
DNA (738bp) protein (246aa)
Precorrin-3B C17-methyltransferase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQE1_9FIRM
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:EHL73889.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_132_000G1_scaffold_27_23
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19360..20079
DNA (720bp) protein (240aa)
precorrin-6x reductase (EC:1.3.1.54)
Precorrin-6x reductase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6Y9_9FIRM
Precorrin-6x reductase {ECO:0000313|EMBL:EOS66750.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_132_000G1_scaffold_27_24
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20092..21285
DNA (1194bp) protein (398aa)
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6T1_9FIRM
Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit {ECO:0000313|EMBL:EOS66749.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_132_000G1_scaffold_27_25
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21282..22637
DNA (1356bp) protein (452aa)
cobyrinic acid a,c-diamide synthase (EC:6.3.5.9)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7E3_9FIRM
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:EOS66748.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_132_000G1_scaffold_27_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22634..23689
DNA (1056bp) protein (352aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00013344}; EC=2.4.2.21 {ECO:0000256|SAAS:SAAS00013328};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MFY5_9FIRM
L3_132_000G1_scaffold_27_27
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23700..24221
DNA (522bp) protein (174aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.1.156 2.7.7.62)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66746.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_132_000G1_scaffold_27_28
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24296..24979
DNA (684bp) protein (228aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
cobalamin-5'-phosphate synthase (EC:2.7.8.26)
Cobalamin synthase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6Y2_9FIRM
L3_132_000G1_scaffold_27_29
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24976..25314
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66744.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
L3_132_000G1_scaffold_27_30
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25302..25898
DNA (597bp) protein (199aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73 5.4.2.1)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL73795.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Displaying items 1-30 of 169 in total

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