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L3_132_000G1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 275 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000G1_scaffold_47_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(421..3327)
DNA (2907bp) protein (969aa)
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFM40927.1}; EC=3.2.1.21 {ECO:0000313|EMBL:EFM40927.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
bgl5; beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K4_9BIFI
L3_132_000G1_scaffold_47_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3614..5611
DNA (1998bp) protein (666aa)
serine/threonine protein kinase (EC:2.7.11.17)
Kinase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K3_9BIFI
Kinase domain protein {ECO:0000313|EMBL:EFM40926.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_132_000G1_scaffold_47_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5749..6729
DNA (981bp) protein (327aa)
protein-disulfide isomerase (EC:2.7.11.1)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K2_9BIFI
Thioredoxin {ECO:0000313|EMBL:ETO94966.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_132_000G1_scaffold_47_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7226..7525
DNA (300bp) protein (100aa)
Hypothetical secreted protein n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q810_BIFDB
hypothetical protein
Hypothetical secreted protein {ECO:0000313|EMBL:ADB10812.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L3_132_000G1_scaffold_47_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7647..8477
DNA (831bp) protein (277aa)
G5 domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S8N9_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28119.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_132_000G1_scaffold_47_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8477..9427
DNA (951bp) protein (317aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bifidobacterium dentium RepID=E0Q9K0_9BIFI
ksgA; dimethyladenosine transferase
L3_132_000G1_scaffold_47_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9424..10323
DNA (900bp) protein (300aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
spE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J9_9BIFI
L3_132_000G1_scaffold_47_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10368..11006
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO94979.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L3_132_000G1_scaffold_47_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11069..12439)
DNA (1371bp) protein (457aa)
CCA tRNA nucleotidyltransferase {ECO:0000313|EMBL:ETO95011.1}; EC=2.7.7.72 {ECO:0000313|EMBL:ETO95011.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
tRNA adenylyltransferase n=2 Tax=Bifidobacterium dentium RepID=E1NAZ7_9BIFI
RNA nucleotidyltransferase
L3_132_000G1_scaffold_47_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12769..13431
DNA (663bp) protein (221aa)
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=4 Tax=Bifidobacterium dentium RepID=D2Q815_BIFDB
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFM40919.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_132_000G1_scaffold_47_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13431..15536
DNA (2106bp) protein (702aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40918.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_132_000G1_scaffold_47_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15533..19249
DNA (3717bp) protein (1239aa)
Integral membrane protein MviN n=2 Tax=Bifidobacterium dentium RepID=E0Q9J4_9BIFI
Putative murein biosynthesis integral membrane protein MurJ {ECO:0000313|EMBL:ETO94969.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
mviN; integral membrane protein MviN
L3_132_000G1_scaffold_47_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19395..21128
DNA (1734bp) protein (578aa)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein {ECO:0000313|EMBL:EFM40916.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFM40916.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ilvB; acetolactate synthase large subunit (EC:1.2.3.3)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J3_9BIFI
L3_132_000G1_scaffold_47_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21309..22241
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
trxB2; trxB2 Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J2_9BIFI
L3_132_000G1_scaffold_47_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22435..23742)
DNA (1308bp) protein (436aa)
ParB-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J1_9BIFI
ParB-like protein {ECO:0000313|EMBL:EFM40914.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
parB; chromosome partitioning protein ParB
L3_132_000G1_scaffold_47_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23745..24725)
DNA (981bp) protein (327aa)
parA; chromosome partitioning protein PrA (EC:1.18.6.1)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28130.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_132_000G1_scaffold_47_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24958..25707)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Bifidobacterium dentium RepID=E0Q9I9_9BIFI
gidB; methyltransferase gidB (Glucose inhibited division protein B)
L3_132_000G1_scaffold_47_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25905..26450)
DNA (546bp) protein (182aa)
Jag protein n=2 Tax=Bifidobacterium dentium RepID=D2Q823_BIFDB
jag; Jag protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28132.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L3_132_000G1_scaffold_47_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26570..27580)
DNA (1011bp) protein (337aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Bifidobacterium dentium RepID=E0Q9I7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28133.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
yidC; YidC Inner membrane protein (Preprotein translocase subunit YidC)
L3_132_000G1_scaffold_47_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28733..30235
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium dentium RepID=B1S8M2_9BIFI
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dnaA; chromosomal replication initiator protein DnaA
L3_132_000G1_scaffold_47_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30710..31834
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA polymerase III, subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Bifidobacterium dentium RepID=E0Q9I3_9BIFI
L3_132_000G1_scaffold_47_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31920..33110
DNA (1191bp) protein (397aa)
DNA replication and repair protein RecF n=2 Tax=Bifidobacterium dentium RepID=E0Q9I2_9BIFI
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
recF; Recombinational DNA repair ATPase RecF
L3_132_000G1_scaffold_47_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33110..33595
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8L9_9BIFI
hypothetical protein
PF05258 family protein {ECO:0000313|EMBL:ETO94984.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L3_132_000G1_scaffold_47_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33809..35923
DNA (2115bp) protein (705aa)
DNA gyrase subunit B {ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU003363};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gyrB; DNA gyrase (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9I0_9BIFI
L3_132_000G1_scaffold_47_25
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


35949..38618
DNA (2670bp) protein (890aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=4 Tax=Bifidobacterium dentium RepID=D2Q6I3_BIFDB
L3_132_000G1_scaffold_47_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38681..39232
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40901.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_132_000G1_scaffold_47_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39548..40894)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q9H7_9BIFI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L3_132_000G1_scaffold_47_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41146..42174
DNA (1029bp) protein (343aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q9H6_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO94983.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L3_132_000G1_scaffold_47_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42364..43689
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40898.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L3_132_000G1_scaffold_47_30
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43771..44526
DNA (756bp) protein (252aa)
AP endonuclease, family 2 n=2 Tax=Bifidobacterium dentium RepID=E0Q9H4_9BIFI
sugar isomerase/epimerase
Xylose isomerase-like TIM barrel domain protein {ECO:0000313|EMBL:ETO95005.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Displaying items 1-30 of 275 in total

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