ggKbase home page

L3_132_000G1_scaffold_559

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000G1_scaffold_559_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(96..215)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9I892_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02446.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
alkaline protease aprF
L3_132_000G1_scaffold_559_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

346..471
DNA (126bp) protein (42aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7LTI3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55403.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_132_000G1_scaffold_559_3
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(488..1429)
DNA (942bp) protein (314aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Malate dehydrogenase n=17 Tax=Bacteroides RepID=D6D0T6_9BACE
L3_132_000G1_scaffold_559_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2064..2654
DNA (591bp) protein (197aa)
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Bacteroides RepID=D6D0T7_9BACE
RNA polymerase sigma factor, sigma-70 family
Sigma-70, region 4 {ECO:0000313|EMBL:EDO13133.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_132_000G1_scaffold_559_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2799..3941
DNA (1143bp) protein (381aa)
Sigma factor regulatory protein, FecR/PupR family n=3 Tax=Bacteroides ovatus RepID=A7LTI7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69248.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Fe2+-dicitrate sensor, membrane component
L3_132_000G1_scaffold_559_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4067..7498
DNA (3432bp) protein (1144aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides ovatus RepID=A7LTI8_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY55238.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_132_000G1_scaffold_559_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7505..9355
DNA (1851bp) protein (617aa)
SusD family protein n=3 Tax=Bacteroides ovatus RepID=A7LTI9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69250.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
SusD family.
L3_132_000G1_scaffold_559_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9376..10836
DNA (1461bp) protein (487aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7LTJ0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55240.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_132_000G1_scaffold_559_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10970..13153
DNA (2184bp) protein (728aa)
Alpha-N-acetylglucosaminidase (NAGLU). (EC:3.2.1.50)
Alpha-N-acetylglucosaminidase (NAGLU) n=3 Tax=Bacteroides ovatus RepID=A7LTJ1_BACOV
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EDO13138.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
L3_132_000G1_scaffold_559_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13140..15008
DNA (1869bp) protein (623aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7LTJ2_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY55242.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_132_000G1_scaffold_559_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15042..16727
DNA (1686bp) protein (562aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7LTJ3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69254.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000G1_scaffold_559_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16922..17794
DNA (873bp) protein (291aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7LTJ4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69255.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000G1_scaffold_559_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18426..19295)
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=8 Tax=Bacteroides RepID=D7K7W8_9BACE
L3_132_000G1_scaffold_559_14
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19444..20160
DNA (717bp) protein (239aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=10 Tax=Bacteroides RepID=A7LTJ7_BACOV
L3_132_000G1_scaffold_559_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20157..20873
DNA (717bp) protein (239aa)
Transporter, MotA/TolQ/ExbB proton channel family protein n=6 Tax=Bacteroides RepID=A7LTJ8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02440.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
outer membrane transport energization protein ExbB (TC 2.C.1.1.1)
L3_132_000G1_scaffold_559_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20881..21297
DNA (417bp) protein (139aa)
Transport energizing protein, ExbD/TolR family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QZC3_9BACE
Biopolymer transport ExbD/TolR family protein {ECO:0000313|EMBL:EXY33443.1}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
putative tansport related protein
L3_132_000G1_scaffold_559_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21304..22179
DNA (876bp) protein (292aa)
TonB family domain protein n=4 Tax=Bacteroides ovatus RepID=A7LTK0_BACOV
TonB family domain-containing protein {ECO:0000313|EMBL:EIY55249.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
TonB family C-terminal domain
L3_132_000G1_scaffold_559_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22207..22758
DNA (552bp) protein (184aa)
DJ-1 family protein n=10 Tax=Bacteroides RepID=A7LTK1_BACOV
DJ-1 family protein {ECO:0000313|EMBL:EIY69261.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
DJ-1 family protein
L3_132_000G1_scaffold_559_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22766..23425
DNA (660bp) protein (220aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Bacteroides RepID=A7LTK2_BACOV
L3_132_000G1_scaffold_559_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23426..25522
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=2 Tax=Bacteroides ovatus RepID=I8XYX0_BACOV
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EIY69263.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000G1_scaffold_559_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25746..26210
DNA (465bp) protein (155aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=9 Tax=Bacteroides RepID=C3QHA9_9BACE
L3_132_000G1_scaffold_559_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26231..27103
DNA (873bp) protein (291aa)
Peptidase, M23 family n=11 Tax=Bacteroides RepID=A7LTK6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN02433.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
peptidase
L3_132_000G1_scaffold_559_23
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27205..27768
DNA (564bp) protein (188aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C3QHB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS30950.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
Domain of Unknown Function (DUF1599).
L3_132_000G1_scaffold_559_24
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27758..29116
DNA (1359bp) protein (453aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3QHB2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO51346.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
hypothetical protein
L3_132_000G1_scaffold_559_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29224..29982
DNA (759bp) protein (253aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TJL5_BACOV
L3_132_000G1_scaffold_559_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30092..30541
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9I8E0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY69269.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Sporulation related domain.
L3_132_000G1_scaffold_559_27
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30549..31139
DNA (591bp) protein (197aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
GTP cyclohydrolase 1 n=5 Tax=Bacteroides RepID=D6D0V7_9BACE
L3_132_000G1_scaffold_559_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31252..33333)
DNA (2082bp) protein (694aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
DNA primase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TJ05_BACOV
DNA primase
L3_132_000G1_scaffold_559_29
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33440..34213)
DNA (774bp) protein (258aa)
prephenate dehydrogenase (EC:1.3.1.12 5.4.99.5)
Prephenate dehydrogenase n=10 Tax=Bacteroides RepID=D4VHL0_9BACE
Putative prephenate dehydrogenase {ECO:0000313|EMBL:EEO51351.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_132_000G1_scaffold_559_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34369..35430)
DNA (1062bp) protein (354aa)
chorismate mutase (EC:2.5.1.54 5.4.99.5)
Phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase n=11 Tax=Bacteroides RepID=D7K7Y5_9BACE
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EIY55262.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
Displaying items 1-30 of 169 in total

View Taxonomy