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L3_132_000M1_scaffold_2471

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_2471_1
unknown

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comp(1..81)
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YL64_BACSE
L3_132_000M1_scaffold_2471_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(119..4405)
DNA (4287bp) protein (1429aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
DNA-directed RNA polymerase subunit beta' n=7 Tax=root RepID=RPOC_BACV8
L3_132_000M1_scaffold_2471_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4444..8256)
DNA (3813bp) protein (1271aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroides RepID=RPOB_BACV8
L3_132_000M1_scaffold_2471_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8359..8694)
DNA (336bp) protein (112aa)
50S ribosomal protein L7/L12 n=14 Tax=Bacteroides RepID=RL7_BACV8
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_132_000M1_scaffold_2471_5
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8691..9191)
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=7 Tax=Bacteroides RepID=A6KYK5_BACV8
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000313|EMBL:EFV68944.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_132_000M1_scaffold_2471_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9207..9905)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=7 Tax=Bacteroides RepID=RL1_BACV8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_132_000M1_scaffold_2471_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9921..10370)
DNA (450bp) protein (150aa)
50S ribosomal protein L11 n=13 Tax=Bacteroides RepID=RL11_BACV8
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_132_000M1_scaffold_2471_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10342..10884)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=7 Tax=Bacteroides RepID=A6KYK8_BACV8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_132_000M1_scaffold_2471_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10898..11092)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=5 Tax=Bacteroides RepID=C6Z0J3_9BACE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
preprotein translocase subunit SecE
L3_132_000M1_scaffold_2471_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11239..12423)
DNA (1185bp) protein (395aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=7 Tax=Bacteroides RepID=EFTU_BACV8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_132_000M1_scaffold_2471_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12963..13262)
DNA (300bp) protein (100aa)
Sigma-54 modulation protein n=7 Tax=Bacteroides RepID=A6KYL0_BACV8
sigma-54 modulation protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:KDS27897.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_132_000M1_scaffold_2471_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13277..14158)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=6 Tax=Bacteroides RepID=A6KYL1_BACV8
tyrosine type site-specific recombinase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_132_000M1_scaffold_2471_13
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14236..14427)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=14 Tax=Bacteroides RepID=RS21_BACV8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_132_000M1_scaffold_2471_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14596..16377
DNA (1782bp) protein (594aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I8ZU31_BACVU
aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:ABR38527.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_2471_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16387..16911
DNA (525bp) protein (175aa)
Acetyltransferase n=5 Tax=Bacteroides RepID=A6KYL4_BACV8
acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EOR98619.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_132_000M1_scaffold_2471_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16957..17448
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A6KYL5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR38529.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_2471_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17562..18515
DNA (954bp) protein (318aa)
Acetyltransferase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYL6_BACV8
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ABR38530.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_2471_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18534..19235)
DNA (702bp) protein (234aa)
Two-component system response regulator n=4 Tax=root RepID=A6KYL7_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY78628.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_132_000M1_scaffold_2471_19
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19260..20645)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Two-component system sensor histidine kinase n=7 Tax=root RepID=A6KYL8_BACV8
two-component system sensor histidine kinase
L3_132_000M1_scaffold_2471_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20767..23064
DNA (2298bp) protein (766aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=A6KYL9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY78626.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_132_000M1_scaffold_2471_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23130..24824)
DNA (1695bp) protein (565aa)
Carboxy-terminal processing protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYM0_BACV8
carboxy-terminal processing protease
Carboxy-terminal processing protease {ECO:0000313|EMBL:ABR38534.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_2471_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24868..25854)
DNA (987bp) protein (329aa)
Putative PfkB family carbohydrate kinase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYM1_BACV8
PfkB family carbohydrate kinase
Putative PfkB family carbohydrate kinase {ECO:0000313|EMBL:ABR38535.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Displaying 22 items

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