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L3_132_000M1_scaffold_1583

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_1583_1

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comp(258..527)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9G281_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX01327.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
protein of unassigned function
L3_132_000M1_scaffold_1583_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(738..1976)
DNA (1239bp) protein (413aa)
TonB-dependent outer membrane receptor n=5 Tax=Bacteroides RepID=A6L7X6_BACV8
TonB-dependent outer membrane receptor
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EYB08086.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_132_000M1_scaffold_1583_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2059..2871)
DNA (813bp) protein (271aa)
TonB-dependent outer membrane receptor n=5 Tax=Bacteroides RepID=A6L7X6_BACV8
TonB-dependent outer membrane receptor
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:KDS54538.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_132_000M1_scaffold_1583_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3388..3615)
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UMN2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS54540.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_132_000M1_scaffold_1583_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3798..4754)
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6Z0X4_9BACE
sodium-dependent transporter
Putative sodium-dependent transporter {ECO:0000313|EMBL:ABR41793.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_1583_6
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4911..6140
DNA (1230bp) protein (410aa)
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Bacteroides RepID=C6Z0X3_9BACE
N-acetylmuramoyl-L-alanine amidase amiA {ECO:0000313|EMBL:EFV66503.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
N-acetylmuramoyl-L-alanine amidase amiA
L3_132_000M1_scaffold_1583_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6160..7047
DNA (888bp) protein (296aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A6L7Y1_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR41795.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_1583_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7385..8791
DNA (1407bp) protein (469aa)
Chromosomal replication initiator protein DnaA n=6 Tax=Bacteroides RepID=A6KWC5_BACV8
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_132_000M1_scaffold_1583_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8876..9616)
DNA (741bp) protein (247aa)
Nitroreductase family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V4E6_BACVU
Nitroreductase family protein {ECO:0000313|EMBL:EFG19296.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
oxidoreductase
L3_132_000M1_scaffold_1583_10
unknown

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9681..9899
DNA (219bp) protein (73aa)

This feature has no annotations

L3_132_000M1_scaffold_1583_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9960..12506
DNA (2547bp) protein (849aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KWC7_BACV8
Putative ribonucleoside reductase {ECO:0000313|EMBL:ABR37733.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
ribonucleoside reductase
L3_132_000M1_scaffold_1583_12
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12599..15034)
DNA (2436bp) protein (812aa)
Outer membrane assembly protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P0C3_9BACE
Outer membrane assembly protein {ECO:0000313|EMBL:CDF17792.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
hypothetical protein
L3_132_000M1_scaffold_1583_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15046..15573)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IVC9_BACVU
Putative uncharacterized protein {ECO:0000313|EMBL:EFG16806.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_132_000M1_scaffold_1583_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15717..16070
DNA (354bp) protein (118aa)
Dihydroneopterin aldolase n=6 Tax=Bacteroides RepID=A6KWC9_BACV8
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:ABR37735.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_1583_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16212..17093)
DNA (882bp) protein (294aa)
Radical SAM domain protein n=5 Tax=Bacteroides RepID=C6Z0W6_9BACE
DNA repair photolyase
Uncharacterized protein {ECO:0000313|EMBL:EIY77757.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_132_000M1_scaffold_1583_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17181..18206)
DNA (1026bp) protein (342aa)
Glycosyltransferase family 2 n=2 Tax=Bacteroides vulgatus RepID=A6KWD1_BACV8
glycosyl transferase family protein
Glycosyltransferase family 2 {ECO:0000313|EMBL:ABR37737.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_1583_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18242..19558)
DNA (1317bp) protein (439aa)
tRNA methylthiotransferase YqeV n=7 Tax=Bacteroides RepID=C6Z0W4_9BACE
Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:ABR37738.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_132_000M1_scaffold_1583_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19664..21337
DNA (1674bp) protein (558aa)
Long-chain-fatty-acid-CoA ligase n=7 Tax=Bacteroides RepID=E5UWH3_9BACE
long-chain-fatty-acid-CoA ligase
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:CDF17797.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_132_000M1_scaffold_1583_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21498..21698
DNA (201bp) protein (67aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C6Z0W2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY77753.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
Displaying 19 items

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