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L3_132_000M1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_70_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

315..1139
DNA (825bp) protein (275aa)
Uncharacterized protein n=3 Tax=Bacteroides ovatus RepID=A7M4W4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63450.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
conserved hypothetical protein (putative transposase or invertase)
L3_132_000M1_scaffold_70_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1402..3513
DNA (2112bp) protein (704aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=A7M4W6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67429.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000M1_scaffold_70_3
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3719..4849
DNA (1131bp) protein (377aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YWA9_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67430.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000M1_scaffold_70_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4851..10808)
DNA (5958bp) protein (1986aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TE40_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67431.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Protein of unknown function (DUF3320).
L3_132_000M1_scaffold_70_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


10905..12707
DNA (1803bp) protein (601aa)
30S ribosomal protein S1 n=10 Tax=Bacteroides RepID=A7M4W9_BACOV
Putative ribosomal protein S1 {ECO:0000313|EMBL:EDO09302.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
SSU ribosomal protein S1P
L3_132_000M1_scaffold_70_6
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13111..13947
DNA (837bp) protein (279aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=5 Tax=Bacteroides RepID=D4WFS7_BACOV
L3_132_000M1_scaffold_70_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13922..15478
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9I3H7_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67434.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
L3_132_000M1_scaffold_70_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15503..16054
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=6 Tax=Bacteroides RepID=C3QSS0_9BACE
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS12395.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
RNA polymerase sigma factor, sigma-70 family
L3_132_000M1_scaffold_70_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16102..16482
DNA (381bp) protein (127aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A7M4X3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY63442.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_132_000M1_scaffold_70_10
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16510..16977
DNA (468bp) protein (156aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=A7M4X4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:CDB59784.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
hypothetical protein
L3_132_000M1_scaffold_70_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17083..17871)
DNA (789bp) protein (263aa)
MazG family protein (EC:3.6.1.19)
MazG family protein n=2 Tax=Bacteroides ovatus RepID=A7M4X5_BACOV
MazG family protein {ECO:0000313|EMBL:EIY67438.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
L3_132_000M1_scaffold_70_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17884..18939)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9I3I3_BACOV
Putative transmembrane zinc-binding protein {ECO:0000313|EMBL:EFI37293.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L3_132_000M1_scaffold_70_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19080..19718
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides ovatus RepID=A7M4X8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09311.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_132_000M1_scaffold_70_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


19784..22420
DNA (2637bp) protein (879aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TE50_BACOV
L3_132_000M1_scaffold_70_15
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22538..24436
DNA (1899bp) protein (633aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroides ovatus RepID=A7M4Y0_BACOV
two-component system sensor histidine kinase
L3_132_000M1_scaffold_70_16
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24752..25327)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides ovatus RepID=A7M4Y1_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY63435.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_132_000M1_scaffold_70_17
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25462..26484
DNA (1023bp) protein (341aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides ovatus RepID=A7M4Y3_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67444.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Fe2+-dicitrate sensor, membrane component
L3_132_000M1_scaffold_70_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26731..30042
DNA (3312bp) protein (1104aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides ovatus RepID=A7M4Y5_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY67445.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
frrG; putative outer membrane protein
L3_132_000M1_scaffold_70_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30055..31569
DNA (1515bp) protein (505aa)
SusD family protein n=5 Tax=Bacteroides RepID=A7M4Y6_BACOV
SusD family protein {ECO:0000313|EMBL:EDO09319.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
frrH; putative outer membrane protein
L3_132_000M1_scaffold_70_20
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31585..32895
DNA (1311bp) protein (437aa)
Fibrobacter succinogene major paralogous domain protein n=4 Tax=Bacteroides RepID=A7M4Y7_BACOV
Conserved domain protein {ECO:0000313|EMBL:EFF52601.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L3_132_000M1_scaffold_70_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32924..34489
DNA (1566bp) protein (522aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7M4Y8_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EDO09321.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
hypothetical protein
L3_132_000M1_scaffold_70_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34572..36905
DNA (2334bp) protein (778aa)
Glycosyl hydrolase family 35 n=2 Tax=Bacteroides ovatus RepID=A7M4Y9_BACOV
Glycosyl hydrolase family 35 {ECO:0000313|EMBL:EDO09322.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
beta-galactosidase
L3_132_000M1_scaffold_70_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36973..39108
DNA (2136bp) protein (712aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=2 Tax=Bacteroides ovatus RepID=A7M4Z0_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67450.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
alpha-N-acetylglucosaminidase
L3_132_000M1_scaffold_70_24
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39158..39307
DNA (150bp) protein (50aa)
RNA polymerase sigma-70 factor, expansion family 1 n=6 Tax=Bacteroides RepID=E5C532_9BACE
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EFS30556.2}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
L3_132_000M1_scaffold_70_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39277..39840
DNA (564bp) protein (188aa)
RNA polymerase sigma-70 factor n=3 Tax=Bacteroides ovatus RepID=A7M4Z1_BACOV
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY67451.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RNA polymerase ECF-type sigma factor
L3_132_000M1_scaffold_70_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39967..41001
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I8YXX6_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67452.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
anti-sigma factor
L3_132_000M1_scaffold_70_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41114..42976
DNA (1863bp) protein (621aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TES3_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY67453.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane receptor proteins, mostly Fe transport
L3_132_000M1_scaffold_70_28
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42963..44330
DNA (1368bp) protein (456aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TES3_BACOV
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY67453.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
Outer membrane receptor proteins, mostly Fe transport
L3_132_000M1_scaffold_70_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44362..46113
DNA (1752bp) protein (584aa)
Tetratricopeptide repeat protein n=6 Tax=Bacteroides RepID=A7M4Z4_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EGN03647.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
SusD family.
L3_132_000M1_scaffold_70_30
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46136..47404
DNA (1269bp) protein (423aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=C3QSU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN03648.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
hypothetical protein
Displaying items 1-30 of 53 in total

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