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L3_132_000M1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_127_1
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25..729
DNA (705bp) protein (235aa)
Transporter major facilitator family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IL59_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CDE51347.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
possible sugar permease
L3_132_000M1_scaffold_127_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1098..3404
DNA (2307bp) protein (769aa)
Aconitate hydratase 1 n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YQB2_9CLOT
Aconitate hydratase 1 {ECO:0000313|EMBL:ENZ10449.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
aconitate hydratase
L3_132_000M1_scaffold_127_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3425..4768
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK66_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
citrate (Si)-synthase
L3_132_000M1_scaffold_127_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4772..5773
DNA (1002bp) protein (334aa)
Isocitrate dehydrogenase (NAD(+)) (EC:1.1.1.41)
Isocitrate dehydrogenase NAD-dependent n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF42_9CLOT
Isocitrate dehydrogenase NAD-dependent {ECO:0000313|EMBL:CCY40715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_132_000M1_scaffold_127_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6174..8588
DNA (2415bp) protein (805aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF50_9CLOT
L3_132_000M1_scaffold_127_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8693..9274
DNA (582bp) protein (194aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RNE6_9CLOT
Ribosomal protein L25, Ctc-form {ECO:0000313|EMBL:ENZ42003.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
L3_132_000M1_scaffold_127_7
unknown

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9383..9640
DNA (258bp) protein (86aa)

This feature has no annotations

L3_132_000M1_scaffold_127_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9646..10374
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40727.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_127_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10416..10697)
DNA (282bp) protein (94aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RMJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ37783.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_132_000M1_scaffold_127_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10765..11193)
DNA (429bp) protein (143aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9X644_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13107.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_132_000M1_scaffold_127_11
unknown

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11330..11497
DNA (168bp) protein (56aa)

This feature has no annotations

L3_132_000M1_scaffold_127_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12081..13256
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40743.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Alanyl-tRNA synthetase, class IIc-like protein
L3_132_000M1_scaffold_127_13
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13273..14442
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JET8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61288.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_132_000M1_scaffold_127_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14621..16066
DNA (1446bp) protein (482aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI5_CLOSW
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADL04263.1}; Flags: Precursor;; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_132_000M1_scaffold_127_15
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16188..17114
DNA (927bp) protein (309aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI6_CLOSW
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:EXG86278.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
binding-protein-dependent transport system inner membrane protein
L3_132_000M1_scaffold_127_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17129..17995
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI7_CLOSW
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADL04265.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_132_000M1_scaffold_127_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18019..20454
DNA (2436bp) protein (812aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI8_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04266.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_132_000M1_scaffold_127_18
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20517..22004)
DNA (1488bp) protein (496aa)
Uncharacterized protein (Fragment) n=1 Tax=gut metagenome RepID=J9GWG5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KEZ90996.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
hypothetical protein
L3_132_000M1_scaffold_127_19
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22001..23845)
DNA (1845bp) protein (615aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI4_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ89350.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
integral membrane sensor signal transduction histidine kinase
L3_132_000M1_scaffold_127_20
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23845..25446)
DNA (1602bp) protein (534aa)
Two component transcriptional regulator, AraC family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9RAI3_CLOSW
Uncharacterized protein {ECO:0000313|EMBL:KEZ89351.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
AraC family transcriptional regulator
L3_132_000M1_scaffold_127_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25656..25892)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5M6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44336.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_127_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25925..26788)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44337.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PHP domain-containing protein
L3_132_000M1_scaffold_127_23
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26885..28000
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JD38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31896.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
ATPase associated with various cellular activities AAA_5
L3_132_000M1_scaffold_127_24
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27961..30327
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JL83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31897.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_132_000M1_scaffold_127_25
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30317..31444
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JCR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31898.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
VWA containing CoxE family protein
L3_132_000M1_scaffold_127_26
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31420..33510
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JCE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31899.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_132_000M1_scaffold_127_27
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33554..37102
DNA (3549bp) protein (1183aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JL88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS31902.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
protein of unknown function DUF4132
L3_132_000M1_scaffold_127_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37273..39093
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44338.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
VanW family protein
L3_132_000M1_scaffold_127_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39380..42916
DNA (3537bp) protein (1179aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXB6_9CLOT
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_132_000M1_scaffold_127_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43240..44112)
DNA (873bp) protein (291aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGT0_9CLOT
Displaying items 1-30 of 50 in total

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