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L3_132_000M1_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_136_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1777
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44473.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative cell wall binding repeat.
L3_132_000M1_scaffold_136_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1872..2942)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44474.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integrase family protein
L3_132_000M1_scaffold_136_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3004..3729)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44475.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_132_000M1_scaffold_136_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4146..4403)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J619_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44476.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system phosphocarrier protein HPr
L3_132_000M1_scaffold_136_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4514..6259)
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6F6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44477.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell envelope-related transcriptional attenuator
L3_132_000M1_scaffold_136_6
unknown

Not on your lists

6744..6998
DNA (255bp) protein (85aa)

This feature has no annotations

L3_132_000M1_scaffold_136_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6964..8793
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ12_9CLOT
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|SAAS:SAAS00039584}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glucosamine/fructose-6-phosphate aminotransferase
L3_132_000M1_scaffold_136_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8862..9500)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42126.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cytidylate kinase
L3_132_000M1_scaffold_136_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9657..10571)
DNA (915bp) protein (305aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ88_9CLOT
RluA family pseudouridine synthase
L3_132_000M1_scaffold_136_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10568..11089)
DNA (522bp) protein (174aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPA6_9CLOT
lipoprotein signal peptidase
L3_132_000M1_scaffold_136_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11086..12195)
DNA (1110bp) protein (370aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ08_9CLOT
L3_132_000M1_scaffold_136_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12277..12792)
DNA (516bp) protein (172aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZJ5_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_136_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12824..13522)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZF0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42121.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alanine racemase
L3_132_000M1_scaffold_136_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13553..14953)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42120.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_136_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15185..15604)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42119.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_136_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15694..16668)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42118.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_132_000M1_scaffold_136_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16668..17063)
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Methylglyoxal synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ79_9CLOT
methylglyoxal synthase
L3_132_000M1_scaffold_136_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17083..18204)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IP98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42114.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell cycle protein
L3_132_000M1_scaffold_136_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18206..18385)
DNA (180bp) protein (60aa)
Cell division topological specificity factor n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZE2_9CLOT
Cell division topological specificity factor {ECO:0000313|EMBL:CCY42111.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_132_000M1_scaffold_136_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18483..19274)
DNA (792bp) protein (264aa)
Site-determining protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ75_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
septum site-determining protein MinD
L3_132_000M1_scaffold_136_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19377..20042)
DNA (666bp) protein (222aa)
Probable septum site-determining protein MinC n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIY7_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
septum formation inhibitor MinC
L3_132_000M1_scaffold_136_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20061..22994)
DNA (2934bp) protein (978aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42102.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
penicillin-binding protein transpeptidase
L3_132_000M1_scaffold_136_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22987..23520)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IP86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42099.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
rod shape-determining protein MreD
L3_132_000M1_scaffold_136_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23520..24362)
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZH5_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
rod shape-determining protein MreC
L3_132_000M1_scaffold_136_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24391..25086)
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ61_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:CCY42095.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA repair protein RadC
L3_132_000M1_scaffold_136_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25269..25520)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IP83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42094.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_132_000M1_scaffold_136_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25567..26862)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42092.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Aluminum resistance family protein
L3_132_000M1_scaffold_136_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26909..27877)
DNA (969bp) protein (323aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IJ58_9CLOT
L3_132_000M1_scaffold_136_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27888..29909)
DNA (2022bp) protein (674aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIW7_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA mismatch repair protein MutL
L3_132_000M1_scaffold_136_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29968..30480)
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=1 Tax=Clostridium sp. CAG:7 RepID=R5IZB7_9CLOT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
16S rRNA processing protein RimM
Displaying items 1-30 of 57 in total

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