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L3_132_000M1_scaffold_192

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Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_132_000M1_scaffold_192_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..414
DNA (414bp) protein (138aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:169 RepID=R6BIT3_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L3_132_000M1_scaffold_192_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

471..2738
DNA (2268bp) protein (756aa)
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Glycosyl hydrolase family 2, sugar binding domain protein n=2 Tax=Ruminococcus gnavus RepID=A7B094_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17285.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_132_000M1_scaffold_192_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2762..4156
DNA (1395bp) protein (465aa)
Transporter, major facilitator family protein n=3 Tax=Lachnospiraceae RepID=A7B095_RUMGN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN78561.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L3_132_000M1_scaffold_192_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4344..5051
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BR76_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17287.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_132_000M1_scaffold_192_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5023..6297
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BQ23_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47464.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
integral membrane sensor signal transduction histidine kinase
L3_132_000M1_scaffold_192_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6346..6489)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B098_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78564.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_132_000M1_scaffold_192_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6728..9028
DNA (2301bp) protein (767aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JXR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN47463.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L3_132_000M1_scaffold_192_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9211..9570
DNA (360bp) protein (120aa)
Transcriptional regulator, ArsR family n=4 Tax=Clostridiales RepID=A7B0A1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47462.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_132_000M1_scaffold_192_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9573..11432
DNA (1860bp) protein (620aa)
Cadmium-translocating P-type ATPase n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BS25_RUMGN
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:ETD17291.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cadA; Cadmium-translocating P-type ATPase
L3_132_000M1_scaffold_192_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11445..11993
DNA (549bp) protein (183aa)
Tetratricopeptide repeat protein n=3 Tax=Lachnospiraceae RepID=A7B0A3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47460.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Tetratricopeptide repeat.
L3_132_000M1_scaffold_192_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12083..12661
DNA (579bp) protein (193aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BQ30_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47459.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L3_132_000M1_scaffold_192_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12662..13888
DNA (1227bp) protein (409aa)
Antioxidant, AhpC/TSA family n=3 Tax=Lachnospiraceae RepID=A7B0A5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17294.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
cytochrome c biogenesis protein transmembrane region
L3_132_000M1_scaffold_192_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13899..15140
DNA (1242bp) protein (414aa)
GTPase HflX n=2 Tax=Clostridiales RepID=F7JXQ7_9FIRM
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GTP-binding protein HflX
L3_132_000M1_scaffold_192_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15198..15518)
DNA (321bp) protein (107aa)
Transcriptional regulator, HxlR family n=3 Tax=Lachnospiraceae RepID=A7B0A7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47456.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ydeP; putative HTH-type transcriptional regulator YdeP
L3_132_000M1_scaffold_192_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15606..15830
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BR87_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47455.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_132_000M1_scaffold_192_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16015..17130)
DNA (1116bp) protein (372aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EDN78575.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EDN78575.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Methionine synthase, vitamin-B12 independent n=3 Tax=Lachnospiraceae RepID=A7B0A9_RUMGN
vitamin-B12 independent methionine synthase
L3_132_000M1_scaffold_192_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17273..17998)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQA7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17299.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Ethanolamine utilization protein
L3_132_000M1_scaffold_192_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18030..18761)
DNA (732bp) protein (244aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Lachnospiraceae RepID=A7B0B1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47451.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_132_000M1_scaffold_192_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18972..19571
DNA (600bp) protein (200aa)
HD domain protein n=3 Tax=Lachnospiraceae RepID=A7B0B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47450.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
metal dependent phosphohydrolase
L3_132_000M1_scaffold_192_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19537..20322
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BR92_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17302.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ATPases involved in chromosome partitioning
L3_132_000M1_scaffold_192_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20330..21289
DNA (960bp) protein (320aa)
Transcriptional regulator, AraC family n=2 Tax=Ruminococcus gnavus RepID=A7B0B4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17303.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC-type DNA-binding domain-containing proteins
L3_132_000M1_scaffold_192_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21349..21579)
DNA (231bp) protein (77aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0B5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47447.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_132_000M1_scaffold_192_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21569..22033)
DNA (465bp) protein (155aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=A7B0B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17305.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA-binding protein
L3_132_000M1_scaffold_192_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22220..22393)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BS41_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17306.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative conjugative transposon protein DUF961family Tn916-like, CTn1-Orf29
L3_132_000M1_scaffold_192_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22412..22612)
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B0B8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47444.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Uncharacterized protein conserved in cyanobacteria
L3_132_000M1_scaffold_192_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22633..23496)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BQ44_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47443.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC family transcriptional regulator
L3_132_000M1_scaffold_192_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23688..24551
DNA (864bp) protein (288aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
4-deoxy-L-threo-5-hexulose uronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BQB8_RUMGN
L3_132_000M1_scaffold_192_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24578..25369
DNA (792bp) protein (264aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Lachnospiraceae RepID=A7B0C1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47441.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_132_000M1_scaffold_192_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25405..26226
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BS46_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17311.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
xylose isomerase domain-containing protein TIM barrel
L3_132_000M1_scaffold_192_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26664..27704
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BRA6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17312.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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